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Yorodumi- PDB-7vtg: Pseudouridine bound structure of Pseudouridine kinase (PUKI) S30A... -
+Open data
-Basic information
Entry | Database: PDB / ID: 7vtg | ||||||
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Title | Pseudouridine bound structure of Pseudouridine kinase (PUKI) S30A mutant from Escherichia coli strain B | ||||||
Components | Pseudouridine kinase | ||||||
Keywords | TRANSFERASE / pseudouridine kinase / pseudourdine / pfkb family | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Escherichia coli (E. coli) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.89859128388 Å | ||||||
Authors | Kim, S.H. / Rhee, S. | ||||||
Funding support | Korea, Republic Of, 1items
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Citation | Journal: J.Biol.Chem. / Year: 2022 Title: Substrate-binding loop interactions with pseudouridine trigger conformational changes that promote catalytic efficiency of pseudouridine kinase PUKI. Authors: Kim, S.H. / Kim, M. / Park, D. / Byun, S. / Rhee, S. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7vtg.cif.gz | 565 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7vtg.ent.gz | 392.7 KB | Display | PDB format |
PDBx/mmJSON format | 7vtg.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 7vtg_validation.pdf.gz | 1.7 MB | Display | wwPDB validaton report |
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Full document | 7vtg_full_validation.pdf.gz | 1.7 MB | Display | |
Data in XML | 7vtg_validation.xml.gz | 49 KB | Display | |
Data in CIF | 7vtg_validation.cif.gz | 68.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/vt/7vtg ftp://data.pdbj.org/pub/pdb/validation_reports/vt/7vtg | HTTPS FTP |
-Related structure data
Related structure data | 7vtdC 7vteC 7vtfC 7vvaC 3kzhS S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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