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Yorodumi- PDB-7r86: Structure of mouse BAI1 (ADGRB1) in complex with mouse Nogo recep... -
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-Basic information
Entry | Database: PDB / ID: 7r86 | ||||||
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Title | Structure of mouse BAI1 (ADGRB1) in complex with mouse Nogo receptor (RTN4R) | ||||||
Components |
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Keywords | CELL ADHESION / adhesion GPCR / O-linked glycosylation / RTN4R / Nogo receptor | ||||||
Function / homology | Function and homology information Roundabout binding / neuronal signal transduction / ganglioside GM1 binding / chondroitin sulfate binding / neuregulin receptor activity / regulation of postsynapse assembly / ganglioside GT1b binding / negative regulation of axon regeneration / postsynaptic actin cytoskeleton organization / engulfment of apoptotic cell ...Roundabout binding / neuronal signal transduction / ganglioside GM1 binding / chondroitin sulfate binding / neuregulin receptor activity / regulation of postsynapse assembly / ganglioside GT1b binding / negative regulation of axon regeneration / postsynaptic actin cytoskeleton organization / engulfment of apoptotic cell / negative regulation of axon extension / phagocytosis, recognition / corpus callosum development / positive regulation of synapse assembly / negative regulation of endothelial cell migration / muscle organ development / negative chemotaxis / regulation of synapse assembly / positive regulation of myoblast fusion / positive regulation of Rho protein signal transduction / positive regulation of reactive oxygen species biosynthetic process / phagocytosis, engulfment / phosphatidylserine binding / phagocytic cup / axonal growth cone / negative regulation of protein ubiquitination / axonogenesis / negative regulation of angiogenesis / positive regulation of GTPase activity / dendritic shaft / axon guidance / G protein-coupled receptor activity / PDZ domain binding / lipopolysaccharide binding / regulation of synaptic plasticity / negative regulation of protein catabolic process / adenylate cyclase-activating G protein-coupled receptor signaling pathway / transmembrane signaling receptor activity / negative regulation of neuron projection development / heparin binding / presynapse / signaling receptor activity / nervous system development / growth cone / perikaryon / postsynaptic membrane / defense response to Gram-negative bacterium / dendritic spine / postsynaptic density / cell surface receptor signaling pathway / neuron projection / membrane raft / external side of plasma membrane / innate immune response / focal adhesion / neuronal cell body / glutamatergic synapse / dendrite / protein-containing complex binding / perinuclear region of cytoplasm / cell surface / endoplasmic reticulum / extracellular space / plasma membrane Similarity search - Function | ||||||
Biological species | Mus musculus (house mouse) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.65 Å | ||||||
Authors | Miao, Y. / Jude, K.M. / Garcia, K.C. | ||||||
Funding support | United States, 1items
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Citation | Journal: Cell / Year: 2021 Title: RTN4/NoGo-receptor binding to BAI adhesion-GPCRs regulates neuronal development. Authors: Wang, J. / Miao, Y. / Wicklein, R. / Sun, Z. / Wang, J. / Jude, K.M. / Fernandes, R.A. / Merrill, S.A. / Wernig, M. / Garcia, K.C. / Sudhof, T.C. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7r86.cif.gz | 305.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7r86.ent.gz | 245 KB | Display | PDB format |
PDBx/mmJSON format | 7r86.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 7r86_validation.pdf.gz | 1.2 MB | Display | wwPDB validaton report |
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Full document | 7r86_full_validation.pdf.gz | 1.2 MB | Display | |
Data in XML | 7r86_validation.xml.gz | 33 KB | Display | |
Data in CIF | 7r86_validation.cif.gz | 49.3 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/r8/7r86 ftp://data.pdbj.org/pub/pdb/validation_reports/r8/7r86 | HTTPS FTP |
-Related structure data
Related structure data | 7r84C 7r85C 1oznS S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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