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Yorodumi- PDB-7qyq: Crystal structure of a DyP-type peroxidase from Pseudomonas putida -
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Open data
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Basic information
| Entry | Database: PDB / ID: 7qyq | |||||||||
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| Title | Crystal structure of a DyP-type peroxidase from Pseudomonas putida | |||||||||
Components | Dyp-type peroxidase family protein | |||||||||
Keywords | OXIDOREDUCTASE / DyP / heme / Pseudomonas putida / lignin / ABTS | |||||||||
| Function / homology | Function and homology information | |||||||||
| Biological species | Pseudomonas putida (bacteria) | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.599 Å | |||||||||
Authors | Borges, P.T. / Silva, D. / Frazao, C. / Martins, L.O. | |||||||||
| Funding support | European Union, United Kingdom, 2items
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Citation | Journal: Comput Struct Biotechnol J / Year: 2022Title: Unveiling molecular details behind improved activity at neutral to alkaline pH of an engineered DyP-type peroxidase. Authors: Borges, P.T. / Silva, D. / Silva, T.F.D. / Brissos, V. / Canellas, M. / Lucas, M.F. / Masgrau, L. / Melo, E.P. / Machuqueiro, M. / Frazao, C. / Martins, L.O. | |||||||||
| History |
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 7qyq.cif.gz | 452.9 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb7qyq.ent.gz | 377.2 KB | Display | PDB format |
| PDBx/mmJSON format | 7qyq.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/qy/7qyq ftp://data.pdbj.org/pub/pdb/validation_reports/qy/7qyq | HTTPS FTP |
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-Related structure data
| Related structure data | ![]() 7qyzC ![]() 7qzaC ![]() 2iizS S: Starting model for refinement C: citing same article ( |
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| Similar structure data | Similarity search - Function & homology F&H Search |
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Links
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Assembly
| Deposited unit | ![]()
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| Unit cell |
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| Components on special symmetry positions |
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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Movie
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Components
About Yorodumi



Pseudomonas putida (bacteria)
X-RAY DIFFRACTION
United Kingdom, 2items
Citation


PDBj
