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Yorodumi- PDB-7oav: Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Ir... -
+Open data
-Basic information
Entry | Database: PDB / ID: 7oav | ||||||
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Title | Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form) | ||||||
Components | Chili RNA Aptamer | ||||||
Keywords | RNA / RNA aptamer / aptamer / Chili / fluorogenic RNA | ||||||
Function / homology | GUANOSINE-5'-TRIPHOSPHATE / : / : / DMHBO+ / RNA / RNA (> 10) Function and homology information | ||||||
Biological species | synthetic construct (others) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.99 Å | ||||||
Authors | Mieczkowski, M. / Pena, V. / Hoebartner, C. | ||||||
Funding support | Germany, 1items
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Citation | Journal: Nat Commun / Year: 2021 Title: Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine. Authors: Mieczkowski, M. / Steinmetzger, C. / Bessi, I. / Lenz, A.K. / Schmiedel, A. / Holzapfel, M. / Lambert, C. / Pena, V. / Hobartner, C. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7oav.cif.gz | 296.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7oav.ent.gz | 203.4 KB | Display | PDB format |
PDBx/mmJSON format | 7oav.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 7oav_validation.pdf.gz | 1.9 MB | Display | wwPDB validaton report |
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Full document | 7oav_full_validation.pdf.gz | 1.9 MB | Display | |
Data in XML | 7oav_validation.xml.gz | 11 KB | Display | |
Data in CIF | 7oav_validation.cif.gz | 14.4 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/oa/7oav ftp://data.pdbj.org/pub/pdb/validation_reports/oa/7oav | HTTPS FTP |
-Related structure data
Related structure data | 7oa3SC 7oawC 7oaxC S: Starting model for refinement C: citing same article (ref.) |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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