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- PDB-7f8i: Crystal structure of HPV6 L1 pentamer -

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Basic information

Entry
Database: PDB / ID: 7f8i
TitleCrystal structure of HPV6 L1 pentamer
ComponentsMajor capsid protein L1
KeywordsVIRAL PROTEIN
Function / homology
Function and homology information


T=7 icosahedral viral capsid / endocytosis involved in viral entry into host cell / virion attachment to host cell / host cell nucleus / structural molecule activity
Similarity search - Function
Major capsid L1 (late) protein, Papillomavirus / Major capsid L1 (late) superfamily, Papillomavirus / L1 (late) protein / Double-stranded DNA virus, group I, capsid
Similarity search - Domain/homology
Major capsid protein L1
Similarity search - Component
Biological speciesHuman papillomavirus type 6
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.366 Å
AuthorsWang, Z.P. / Wang, D.N. / Gu, Y. / Li, S.W.
Funding support China, 1items
OrganizationGrant numberCountry
National Science Foundation (NSF, China)81971932 China
CitationJournal: Sci Bull (Beijing) / Year: 2024
Title: Rational design of a cross-type HPV vaccine through immunodominance shift guided by a cross-neutralizing antibody.
Authors: Wang, Z. / Wang, D. / Chen, J. / Gao, F. / Jiang, Y. / Yang, C. / Qian, C. / Chi, X. / Zhang, S. / Xu, Y. / Lu, Y. / Shen, J. / Zhang, C. / Li, J. / Zhou, L. / Li, T. / Zheng, Q. / Yu, H. / ...Authors: Wang, Z. / Wang, D. / Chen, J. / Gao, F. / Jiang, Y. / Yang, C. / Qian, C. / Chi, X. / Zhang, S. / Xu, Y. / Lu, Y. / Shen, J. / Zhang, C. / Li, J. / Zhou, L. / Li, T. / Zheng, Q. / Yu, H. / Li, S. / Xia, N. / Gu, Y.
History
DepositionJul 2, 2021Deposition site: PDBJ / Processing site: PDBJ
Revision 1.0Jul 6, 2022Provider: repository / Type: Initial release
Revision 1.1Nov 29, 2023Group: Data collection / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / pdbx_initial_refinement_model / struct_ncs_dom_lim
Item: _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id ..._struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id
Revision 1.2Nov 13, 2024Group: Structure summary / Category: pdbx_entry_details / pdbx_modification_feature
Revision 1.3Feb 26, 2025Group: Database references / Category: citation / citation_author
Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Major capsid protein L1
B: Major capsid protein L1
C: Major capsid protein L1
D: Major capsid protein L1
E: Major capsid protein L1
F: Major capsid protein L1
G: Major capsid protein L1
H: Major capsid protein L1
I: Major capsid protein L1
J: Major capsid protein L1


Theoretical massNumber of molelcules
Total (without water)550,98110
Polymers550,98110
Non-polymers00
Water00
1
A: Major capsid protein L1
B: Major capsid protein L1
F: Major capsid protein L1
H: Major capsid protein L1
I: Major capsid protein L1


Theoretical massNumber of molelcules
Total (without water)275,4915
Polymers275,4915
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area35140 Å2
ΔGint-175 kcal/mol
Surface area73330 Å2
MethodPISA
2
C: Major capsid protein L1
D: Major capsid protein L1
E: Major capsid protein L1
G: Major capsid protein L1
J: Major capsid protein L1


Theoretical massNumber of molelcules
Total (without water)275,4915
Polymers275,4915
Non-polymers00
Water0
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area35320 Å2
ΔGint-178 kcal/mol
Surface area75290 Å2
MethodPISA
Unit cell
Length a, b, c (Å)308.956, 106.663, 198.708
Angle α, β, γ (deg.)90.000, 125.960, 90.000
Int Tables number5
Space group name H-MC121
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
11(chain A and (resid 12 through 160 or resid 174 through 460))
21(chain B and (resid 12 through 160 or resid 174 through 460))
31(chain C and (resid 12 through 160 or resid 174 through 460))
41(chain D and (resid 12 through 160 or resid 174 through 460))
51(chain E and (resid 12 through 160 or resid 174 through 460))
61(chain F and (resid 12 through 160 or resid 174 through 460))
71(chain G and (resid 12 through 160 or resid 174 through 460))
81(chain H and (resid 12 through 160 or resid 174 through 460))
91(chain I and (resid 12 through 160 or resid 174 through 460))
101(chain J and (resid 12 through 160 or resid 174 through 460))

NCS domain segments:

Ens-ID: 1

Dom-IDComponent-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDSelection detailsAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11LYSLYSLYSLYS(chain A and (resid 12 through 160 or resid 174 through 460))AA12 - 16015 - 163
12CYSCYSSERSER(chain A and (resid 12 through 160 or resid 174 through 460))AA174 - 460177 - 463
21LYSLYSLYSLYS(chain B and (resid 12 through 160 or resid 174 through 460))BB12 - 16015 - 163
22CYSCYSSERSER(chain B and (resid 12 through 160 or resid 174 through 460))BB174 - 460177 - 463
31LYSLYSLYSLYS(chain C and (resid 12 through 160 or resid 174 through 460))CC12 - 16015 - 163
32CYSCYSSERSER(chain C and (resid 12 through 160 or resid 174 through 460))CC174 - 460177 - 463
41LYSLYSLYSLYS(chain D and (resid 12 through 160 or resid 174 through 460))DD12 - 16015 - 163
42CYSCYSSERSER(chain D and (resid 12 through 160 or resid 174 through 460))DD174 - 460177 - 463
51LYSLYSLYSLYS(chain E and (resid 12 through 160 or resid 174 through 460))EE12 - 16015 - 163
52CYSCYSSERSER(chain E and (resid 12 through 160 or resid 174 through 460))EE174 - 460177 - 463
61LYSLYSLYSLYS(chain F and (resid 12 through 160 or resid 174 through 460))FF12 - 16015 - 163
62CYSCYSSERSER(chain F and (resid 12 through 160 or resid 174 through 460))FF174 - 460177 - 463
71LYSLYSLYSLYS(chain G and (resid 12 through 160 or resid 174 through 460))GG12 - 16015 - 163
72CYSCYSSERSER(chain G and (resid 12 through 160 or resid 174 through 460))GG174 - 460177 - 463
81LYSLYSLYSLYS(chain H and (resid 12 through 160 or resid 174 through 460))HH12 - 16015 - 163
82CYSCYSSERSER(chain H and (resid 12 through 160 or resid 174 through 460))HH174 - 460177 - 463
91LYSLYSLYSLYS(chain I and (resid 12 through 160 or resid 174 through 460))II12 - 16015 - 163
92CYSCYSSERSER(chain I and (resid 12 through 160 or resid 174 through 460))II174 - 460177 - 463
101LYSLYSLYSLYS(chain J and (resid 12 through 160 or resid 174 through 460))JJ12 - 16015 - 163
102CYSCYSSERSER(chain J and (resid 12 through 160 or resid 174 through 460))JJ174 - 460177 - 463

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Components

#1: Protein
Major capsid protein L1


Mass: 55098.113 Da / Num. of mol.: 10
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Human papillomavirus type 6 / Gene: L1 / Production host: Escherichia coli (E. coli) / References: UniProt: Q9W9C6
Has protein modificationY

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.4 Å3/Da / Density % sol: 48.86 %
Crystal growTemperature: 293.15 K / Method: vapor diffusion, hanging drop / Details: 0.1M Succinic acid pH 5.5, 9.5% PEG 3350

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Data collection

DiffractionMean temperature: 123.15 K / Serial crystal experiment: N
Diffraction sourceSource: SYNCHROTRON / Site: SSRF / Beamline: BL17U1 / Wavelength: 0.9792 Å
DetectorType: ADSC QUANTUM 315r / Detector: CCD / Date: Dec 28, 2014
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9792 Å / Relative weight: 1
ReflectionResolution: 3.36→50 Å / Num. obs: 70378 / % possible obs: 95.2 % / Redundancy: 2.8 % / Rsym value: 0.108 / Net I/σ(I): 10.8
Reflection shellResolution: 3.36→3.42 Å / Num. unique obs: 6595 / Rsym value: 0.842

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Processing

Software
NameVersionClassification
HKL-2000data scaling
PHENIX1.15.2_3472refinement
PDB_EXTRACT3.27data extraction
HKL-2000data reduction
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: 2R5K

2r5k


Resolution: 3.366→33.877 Å / SU ML: 0.5 / Cross valid method: THROUGHOUT / σ(F): 1.35 / Phase error: 32.06 / Stereochemistry target values: ML
RfactorNum. reflection% reflection
Rfree0.2939 3590 5.11 %
Rwork0.256 66631 -
obs0.2579 70221 94.4 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Displacement parametersBiso max: 270.41 Å2 / Biso mean: 105.4797 Å2 / Biso min: 41.9 Å2
Refinement stepCycle: final / Resolution: 3.366→33.877 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms32368 0 0 0 32368
Num. residues----4130
Refine LS restraints NCS
Ens-IDDom-IDAuth asym-IDNumberRefine-IDRmsType
11A19471X-RAY DIFFRACTION8.936TORSIONAL
12B19471X-RAY DIFFRACTION8.936TORSIONAL
13C19471X-RAY DIFFRACTION8.936TORSIONAL
14D19471X-RAY DIFFRACTION8.936TORSIONAL
15E19471X-RAY DIFFRACTION8.936TORSIONAL
16F19471X-RAY DIFFRACTION8.936TORSIONAL
17G19471X-RAY DIFFRACTION8.936TORSIONAL
18H19471X-RAY DIFFRACTION8.936TORSIONAL
19I19471X-RAY DIFFRACTION8.936TORSIONAL
110J19471X-RAY DIFFRACTION8.936TORSIONAL
LS refinement shell

Refine-ID: X-RAY DIFFRACTION / Rfactor Rfree error: 0

Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection Rwork% reflection obs (%)
3.3665-3.41070.3471200.3558210978
3.4107-3.45740.38471380.347257296
3.4574-3.50680.39781400.3452258397
3.5068-3.55910.36241570.3291263597
3.5591-3.61460.36941490.3225259197
3.6146-3.67380.40241330.3122263296
3.6738-3.73710.33811380.3115255196
3.7371-3.80490.3151460.29265697
3.8049-3.8780.34221300.2991257196
3.878-3.95710.3411410.2922263396
3.9571-4.0430.30111390.2897256696
4.043-4.13690.31461460.2673257296
4.1369-4.24010.28351460.2655259996
4.2401-4.35450.29411310.2485256596
4.3545-4.48240.29531320.2478260495
4.4824-4.62670.30461240.2493255794
4.6267-4.79170.25381410.2161257595
4.7917-4.98290.25151390.2082256395
4.9829-5.2090.30421470.2288253494
5.209-5.48250.2421480.2181254394
5.4825-5.82440.32131460.2457256194
5.8244-6.27150.32831350.2683257294
6.2715-6.89780.30461270.2675251593
6.8978-7.88490.27421290.2426258093
7.8849-9.8930.25181440.2161259094
9.893-33.8770.23521240.2313260291
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
14.7852.5423-1.08762.617-0.11761.61870.0876-0.18890.04040.31480.0837-0.0932-0.24990.0588-0.14880.62680.0726-0.2810.4159-0.02320.5461-68.6777-51.127868.5811
22.51050.3824-1.85512.0603-0.56593.9287-0.05370.0772-0.10570.0480.1415-0.03420.39670.2434-0.1240.50380.0331-0.30770.3765-0.0080.6185-60.9519-54.700551.3675
31.1526-0.1752-1.15610.00910.75943.8774-0.25480.2318-0.1245-0.06380.3047-0.00570.52310.1723-0.0340.6432-0.028-0.10480.4372-0.01520.7609-59.278-56.462243.003
42.43490.4776-0.7337-0.01650.40622.0329-0.0586-0.1603-0.43180.1152-0.0634-0.3403-0.1203-0.0050.12240.66160.012-0.05330.42370.09190.7405-67.9634-49.607864.3363
50.570.3127-1.48394.36320.49953.7641-0.4614-0.7313-0.24730.66730.34420.5867-0.63750.57940.05690.67140.0113-0.0690.74190.1640.6728-75.2193-48.662672.7504
63.49810.1254-0.38261.8566-0.70591.29470.06640.2192-0.0559-0.12070.10430.47980.7543-0.9984-0.03730.9104-0.3931-0.10240.9989-0.04810.6041-84.2935-72.361835.1938
71.3272-0.5975-1.00171.1292-0.17261.9098-0.31320.7177-0.0051-0.28550.1241-0.05140.302-0.64570.20620.6495-0.1782-0.16470.8151-0.11110.5489-67.3496-53.422518.3323
85.39841.6551-0.05321.63610.81522.168-0.29990.52350.8288-0.18950.14670.23920.3489-0.53640.13760.7806-0.2225-0.24380.70120.00640.6795-71.1526-64.943136.3628
94.30692.82190.66152.13890.68241.2355-1.06321.0418-1.0801-0.28360.30790.11021.7124-0.6695-0.05191.1405-0.55970.08981.1083-0.31681.1141-91.2128-74.718734.1299
105.18342.05780.00731.61440.66643.3321-0.3904-0.44980.74060.8152-0.12480.4071-0.03540.14640.37020.75470.0897-0.090.39490.13760.8022-16.1935-78.515570.8498
113.91754.2701-3.64694.7086-3.3936.0983-0.1208-0.55630.78650.31220.3033-0.27790.56250.3827-0.23671.15120.361-0.10950.6983-0.11430.87533.3395-83.110970.7246
121.92221.93490.83532.8290.53541.5330.5418-0.7387-0.01050.8198-0.41550.10130.34950.5102-0.01840.74230.153-0.18890.45570.17710.9468-5.6138-78.095267.2979
135.74182.9-1.70031.7421-0.63544.0802-0.72071.1666-1.38870.0780.2644-0.76530.69570.80310.29840.80860.2452-0.10781.1033-0.03661.418712.7737-82.138345.256
144.65520.2347-0.96461.719-1.33663.2313-0.46050.2249-0.5594-0.229-0.022-0.49720.83710.56820.44220.79540.22530.03610.75380.05530.91214.4989-82.076650.3701
156.0135-0.3719-2.30054.86730.02742.3305-0.61460.8687-1.6492-0.4657-0.6760.05180.07620.25751.13730.69870.0558-0.06911.1252-0.1020.80822.3014-80.827725.8081
160.74560.679-1.11550.9399-0.26522.1537-0.0235-0.0324-0.19550.3548-0.1929-0.15960.3810.85050.06530.73350.162-0.21790.84620.06561.04773.7237-72.376465.0543
174.31372.8544-0.59052.51420.89821.9486-0.1587-0.5104-0.99290.5464-0.521-0.38330.66390.17140.49531.0788-0.0381-0.00180.3640.04431.1045-15.1009-84.219372.4216
184.4199-3.6373-1.51092.60420.86763.17750.36780.44290.0552-0.3193-0.33130.08910.05350.2399-0.25150.4472-0.1658-0.22350.6435-0.09820.5129-8.0549-44.362116.4188
197.2755-1.3711-0.39664.89480.42663.34240.30171.0008-0.5234-1.0971-0.31391.26990.1053-1.1735-0.0540.6171-0.03-0.26530.7741-0.12790.7968-25.6558-40.261314.7197
201.00060.01160.76761.5859-0.14371.55150.09560.53580.2527-0.0742-0.0555-0.3103-0.23510.617-0.07570.6948-0.20180.04550.9013-0.08670.746311.2381-39.007529.3399
214.5838-0.649-0.7191.36090.09860.91460.12121.1088-0.0775-0.4748-0.07540.2874-0.0631-0.06030.01120.6291-0.0655-0.16821.0773-0.05510.6433-11.9456-45.021917.2967
226.6287-0.31530.25541.27050.09262.0078-0.9775-0.04960.3238-0.08890.30280.19820.96030.00680.45720.7986-0.04490.00030.3231-0.20060.689-14.5023-80.866130.7749
237.8559-0.79420.03351.8528-2.34812.73620.0071-0.6454-0.17140.02720.5890.31690.1323-0.2042-0.38220.9285-0.2614-0.0020.6219-0.39481.0017-20.7461-83.459130.2722
242.36851.19740.45132.216-1.4373.0898-0.16360.476-0.2553-0.4094-0.3175-0.59910.48770.66570.47380.80030.16910.06390.8988-0.25440.976710.6193-67.506527.0049
258.6731.0261-4.64035.5038-0.40144.2322-0.0591.60830.4362-2.29481.0258-0.7769-0.13750.3492-0.79330.8381-0.3520.0961.6347-0.53581.05564.2086-64.41944.3244
261.65761.5537-1.0942.1351-0.16120.9957-0.33950.3076-0.1931-0.18080.0809-0.26350.23160.30040.19920.6270.0091-0.05970.8732-0.15070.88361.2949-70.105729.0006
275.22170.07760.6861.4628-2.38034.02440.38520.5163-0.4819-0.0949-0.17130.76511.04370.2345-0.22420.8465-0.12950.01310.5991-0.42751.307-25.0497-81.791328.1326
288.1557-0.17390.77771.1243-0.44040.132-0.08160.5010.2345-0.03360.27030.26930.0315-0.9364-0.19790.79610.0135-0.19621.60030.12490.6493-88.1973-42.94816.0705
293.3683-1.52331.04662.21860.87711.53720.18151.116-1.0353-0.3963-0.06620.0078-0.1017-0.6556-0.11221.01920.1337-0.20121.29270.20030.0489-83.3593-38.65399.1241
302.90550.4674-0.04290.56580.10091.81220.02180.99890.3416-0.33480.24510.2594-0.5552-0.8122-0.20991.04340.1523-0.08331.35970.26480.6932-79.2886-32.833110.5881
313.2861-0.27210.6690.37130.23030.54240.25631.68220.3247-0.28890.73380.40261.1742-2.1447-0.58081.0659-0.3587-0.2572.54560.11641.0298-98.8148-47.5968.1673
322.7825-1.35721.45613.41590.4563.37230.63480.33420.38220.794-0.6178-0.0276-0.44370.8147-0.25361.1183-0.71330.21350.3425-0.18720.97512.1432-20.78446.1168
332.57410.11590.04664.082-0.27873.6322-0.05980.9830.8317-0.1796-0.32760.6514-1.1593-0.05760.22441.0943-0.3679-0.0510.5722-0.19581.2472-13.6568-12.641949.6194
340.5068-0.8115-1.08522.32610.72561.65560.0837-0.29240.9261-0.14560.2572-0.5904-0.32681.0096-0.18540.8848-0.5686-0.01341.5739-0.03931.169920.3952-37.648550.521
352.8756-1.4271-0.31532.0922-0.62930.8642-0.0175-0.65780.61180.72460.1109-0.7838-0.3661-0.02270.07590.8652-0.4229-0.15291.4584-0.22371.073820.7797-28.545260.0713
364.0476-3.4727-2.12055.69090.86651.44080.4971-0.70170.63260.5902-0.1791-0.8624-0.52720.3923-0.35931.0358-0.4071-0.02041.069-0.06890.72634.7235-34.51157.4839
372.4823-1.12370.52275.0712-0.70436.65970.4037-1.63210.4502-0.4646-0.2096-0.1306-0.33150.99810.23210.9758-0.5364-0.4541.64450.34491.559636.0015-49.688865.8586
381.4396-1.2273-0.24641.08910.51652.28840.5583-0.30220.18330.2202-0.3378-0.2196-0.78380.8748-0.02280.8111-0.509-0.04460.8427-0.04681.09584.5312-31.870943.7988
393.02170.6208-0.5744-0.0310.03942.1219-0.09440.3741-1.16660.3872-0.19770.8797-0.40861.1336-0.01641.0415-0.60780.23310.8936-0.18161.14444.5341-24.820538.6677
405.0622-0.4388-1.68083.99030.22844.9254-0.24250.0578-0.38870.6820.2404-0.4558-1.42511.2276-0.13261.8731-0.73270.59210.7559-0.69231.4758-7.9275-7.107663.2061
419.815-0.51443.29151.30921.6933.60820.48860.3264-0.0195-0.3586-0.525-0.03760.1156-0.50520.11460.9902-0.40450.23990.9072-0.06060.8956-12.4387-20.447241.2748
422.34940.3296-2.40040.8334-0.93543.9006-0.1234-0.38910.66810.32130.43450.0456-0.899-0.2221-0.6061.85830.25050.2940.32070.02221.0709-73.9405-10.377860.9658
430.66551.1515-0.30652.307-1.71735.03681.13150.36521.2971-0.17460.35390.3402-3.0188-1.35750.85691.42150.1308-0.168-0.196-0.25570.7776-75.5221-14.675358.6558
445.254-1.362-3.78732.1541.08395.8306-0.2693-0.7995-0.03660.48970.1672-0.34390.1570.93840.00231.0041-0.1589-0.15260.47940.02540.978-51.3202-30.073554.4604
453.4001-0.50360.06863.3214-0.09012.41560.1448-0.69350.45170.73230.42820.0289-0.73710.4538-0.50040.8686-0.0320.02270.5264-0.09020.5998-57.2833-29.463357.6606
460.9762-0.3988-0.43232.78650.64552.6310.3740.30370.5493-0.0001-0.12110.4607-0.9669-0.5751-0.35030.92650.01010.07690.440.0750.7166-66.7411-28.489253.2744
471.2133-1.1446-1.26621.90560.24630.93590.169-0.2290.09840.139-0.0587-0.2185-0.9290.0567-0.47361.6805-0.07120.39940.5322-0.00611.2669-68.7869-10.935355.0542
482.4906-0.2512-1.43531.4560.68164.0265-0.4444-0.89551.13020.73210.58720.1249-0.8832-0.78740.03111.7570.40670.16150.7813-0.11851.0047-82.0142-8.335362.2187
491.9161-0.6476-1.94330.34791.01722.4883-0.17470.92460.738-1.0623-0.34680.9009-0.6756-0.6522-0.45742.49180.78740.43351.22970.99090.5461-87.9422-6.291722.0502
501.18040.02840.30360.74731.03452.9952-0.39790.34810.56410.07390.4495-0.0739-1.567-0.3996-0.012.14710.34010.26620.310.43971.0724-67.9151-11.033732.9561
517.7304-1.7211-0.52161.0154-0.60150.79130.53530.36381.2479-0.1310.24490.6162-0.7404-0.7453-0.61391.14440.35610.10020.94210.3341.0665-77.0141-23.558929.5933
523.6896-0.6033-0.41961.75350.47561.51361.06050.74010.3186-0.2559-0.47140.2362-2.2234-0.325-0.3462.00140.77520.27591.31060.81110.8769-80.3644-13.856718.9107
532.3588-1.176-1.91861.4581.29051.56430.38010.6281.1833-0.64630.0058-0.0965-0.8971-0.2648-0.05711.45540.7022-0.24571.54130.5821.3851-97.8556-2.499327.1192
542.0389-0.0393-1.74521.6677-0.80742.17310.1317-0.5624-0.29730.6402-0.3491-0.4057-0.32640.84220.11440.8555-0.3747-0.26131.1702-0.07560.876211.3145-52.380475.155
551.95090.0832-1.09430.53550.47011.76560.1174-0.50940.23350.45280.0473-0.1455-0.33350.96-0.17250.8759-0.2377-0.20151.0247-0.06040.81036.4354-49.641672.779
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection detailsAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1chain 'A' and (resid 12 through 77 )A12 - 77
2X-RAY DIFFRACTION2chain 'A' and (resid 78 through 170 )A78 - 170
3X-RAY DIFFRACTION3chain 'A' and (resid 171 through 298 )A171 - 298
4X-RAY DIFFRACTION4chain 'A' and (resid 299 through 390 )A299 - 390
5X-RAY DIFFRACTION5chain 'A' and (resid 391 through 460 )A391 - 460
6X-RAY DIFFRACTION6chain 'B' and (resid 12 through 99 )B12 - 99
7X-RAY DIFFRACTION7chain 'B' and (resid 100 through 301 )B100 - 301
8X-RAY DIFFRACTION8chain 'B' and (resid 302 through 370 )B302 - 370
9X-RAY DIFFRACTION9chain 'B' and (resid 371 through 460 )B371 - 460
10X-RAY DIFFRACTION10chain 'C' and (resid 12 through 38 )C12 - 38
11X-RAY DIFFRACTION11chain 'C' and (resid 39 through 77 )C39 - 77
12X-RAY DIFFRACTION12chain 'C' and (resid 78 through 115 )C78 - 115
13X-RAY DIFFRACTION13chain 'C' and (resid 116 through 170 )C116 - 170
14X-RAY DIFFRACTION14chain 'C' and (resid 171 through 251 )C171 - 251
15X-RAY DIFFRACTION15chain 'C' and (resid 252 through 279 )C252 - 279
16X-RAY DIFFRACTION16chain 'C' and (resid 280 through 370 )C280 - 370
17X-RAY DIFFRACTION17chain 'C' and (resid 371 through 460 )C371 - 460
18X-RAY DIFFRACTION18chain 'D' and (resid 12 through 60 )D12 - 60
19X-RAY DIFFRACTION19chain 'D' and (resid 61 through 99 )D61 - 99
20X-RAY DIFFRACTION20chain 'D' and (resid 100 through 301 )D100 - 301
21X-RAY DIFFRACTION21chain 'D' and (resid 302 through 460 )D302 - 460
22X-RAY DIFFRACTION22chain 'E' and (resid 12 through 48 )E12 - 48
23X-RAY DIFFRACTION23chain 'E' and (resid 49 through 99 )E49 - 99
24X-RAY DIFFRACTION24chain 'E' and (resid 100 through 161 )E100 - 161
25X-RAY DIFFRACTION25chain 'E' and (resid 162 through 183 )E162 - 183
26X-RAY DIFFRACTION26chain 'E' and (resid 184 through 370 )E184 - 370
27X-RAY DIFFRACTION27chain 'E' and (resid 371 through 460 )E371 - 460
28X-RAY DIFFRACTION28chain 'F' and (resid 12 through 60 )F12 - 60
29X-RAY DIFFRACTION29chain 'F' and (resid 61 through 135 )F61 - 135
30X-RAY DIFFRACTION30chain 'F' and (resid 136 through 390 )F136 - 390
31X-RAY DIFFRACTION31chain 'F' and (resid 391 through 460 )F391 - 460
32X-RAY DIFFRACTION32chain 'G' and (resid 12 through 60 )G12 - 60
33X-RAY DIFFRACTION33chain 'G' and (resid 61 through 99 )G61 - 99
34X-RAY DIFFRACTION34chain 'G' and (resid 100 through 161 )G100 - 161
35X-RAY DIFFRACTION35chain 'G' and (resid 162 through 222 )G162 - 222
36X-RAY DIFFRACTION36chain 'G' and (resid 223 through 251 )G223 - 251
37X-RAY DIFFRACTION37chain 'G' and (resid 252 through 279 )G252 - 279
38X-RAY DIFFRACTION38chain 'G' and (resid 280 through 344 )G280 - 344
39X-RAY DIFFRACTION39chain 'G' and (resid 345 through 370 )G345 - 370
40X-RAY DIFFRACTION40chain 'G' and (resid 371 through 431 )G371 - 431
41X-RAY DIFFRACTION41chain 'G' and (resid 432 through 462 )G432 - 462
42X-RAY DIFFRACTION42chain 'H' and (resid 12 through 77 )H12 - 77
43X-RAY DIFFRACTION43chain 'H' and (resid 78 through 115 )H78 - 115
44X-RAY DIFFRACTION44chain 'H' and (resid 116 through 170 )H116 - 170
45X-RAY DIFFRACTION45chain 'H' and (resid 171 through 264 )H171 - 264
46X-RAY DIFFRACTION46chain 'H' and (resid 265 through 324 )H265 - 324
47X-RAY DIFFRACTION47chain 'H' and (resid 325 through 389 )H325 - 389
48X-RAY DIFFRACTION48chain 'H' and (resid 390 through 460 )H390 - 460
49X-RAY DIFFRACTION49chain 'I' and (resid 12 through 76 )I12 - 76
50X-RAY DIFFRACTION50chain 'I' and (resid 77 through 279 )I77 - 279
51X-RAY DIFFRACTION51chain 'I' and (resid 280 through 301 )I280 - 301
52X-RAY DIFFRACTION52chain 'I' and (resid 302 through 370 )I302 - 370
53X-RAY DIFFRACTION53chain 'I' and (resid 371 through 460 )I371 - 460
54X-RAY DIFFRACTION54chain 'J' and (resid 12 through 222 )J12 - 222
55X-RAY DIFFRACTION55chain 'J' and (resid 223 through 460 )J223 - 460

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