- PDB-7ew5: immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5 -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 7ew5
Title
immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5
Components
Heavy chain of 13H5
Light chain of 13H5
Major capsid protein L1
Keywords
VIRAL PROTEIN / immune complex
Function / homology
Function and homology information
T=7 icosahedral viral capsid / endocytosis involved in viral entry into host cell / host cell nucleus / virion attachment to host cell / structural molecule activity Similarity search - Function
Major capsid L1 (late) protein, Papillomavirus / Major capsid L1 (late) superfamily, Papillomavirus / L1 (late) protein / Double-stranded DNA virus, group I, capsid Similarity search - Domain/homology
#200 - Aug 2016 Quasisymmetry in Icosahedral Viruses similarity (2)
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Assembly
Deposited unit
A: Major capsid protein L1 D: Major capsid protein L1 G: Major capsid protein L1 J: Major capsid protein L1 M: Major capsid protein L1 P: Major capsid protein L1 S: Major capsid protein L1 V: Major capsid protein L1 Y: Major capsid protein L1 b: Major capsid protein L1 B: Heavy chain of 13H5 C: Light chain of 13H5 E: Heavy chain of 13H5 F: Light chain of 13H5 H: Heavy chain of 13H5 I: Light chain of 13H5 K: Heavy chain of 13H5 L: Light chain of 13H5 N: Heavy chain of 13H5 O: Light chain of 13H5 g: Heavy chain of 13H5 j: Light chain of 13H5 Q: Heavy chain of 13H5 R: Light chain of 13H5 T: Heavy chain of 13H5 U: Light chain of 13H5 W: Heavy chain of 13H5 X: Light chain of 13H5 Z: Heavy chain of 13H5 a: Light chain of 13H5
A: Major capsid protein L1 D: Major capsid protein L1 G: Major capsid protein L1 J: Major capsid protein L1 M: Major capsid protein L1 B: Heavy chain of 13H5 C: Light chain of 13H5 E: Heavy chain of 13H5 F: Light chain of 13H5 H: Heavy chain of 13H5 I: Light chain of 13H5 K: Heavy chain of 13H5 L: Light chain of 13H5 N: Heavy chain of 13H5 O: Light chain of 13H5
defined by author
Evidence: gel filtration
512 kDa, 15 polymers
Theoretical mass
Number of molelcules
Total (without water)
512,103
15
Polymers
512,103
15
Non-polymers
0
0
Water
0
Type
Name
Symmetry operation
Number
identity operation
1_555
x,y,z
1
2
P: Major capsid protein L1 S: Major capsid protein L1 V: Major capsid protein L1 Y: Major capsid protein L1 b: Major capsid protein L1 g: Heavy chain of 13H5 j: Light chain of 13H5 Q: Heavy chain of 13H5 R: Light chain of 13H5 T: Heavy chain of 13H5 U: Light chain of 13H5 W: Heavy chain of 13H5 X: Light chain of 13H5 Z: Heavy chain of 13H5 a: Light chain of 13H5