+Open data
-Basic information
Entry | Database: PDB / ID: 6zqh | ||||||
---|---|---|---|---|---|---|---|
Title | Yeast Uba1 in complex with ubiquitin | ||||||
Components |
| ||||||
Keywords | LIGASE / Ubiquitin / E1 | ||||||
Function / homology | Function and homology information E1 ubiquitin-activating enzyme / Neddylation / ubiquitin activating enzyme activity / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) / modification-dependent protein catabolic process / protein tag activity / ribosomal small subunit assembly / cytosolic small ribosomal subunit / ribosome biogenesis / cytoplasmic translation ...E1 ubiquitin-activating enzyme / Neddylation / ubiquitin activating enzyme activity / maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA,5S) / modification-dependent protein catabolic process / protein tag activity / ribosomal small subunit assembly / cytosolic small ribosomal subunit / ribosome biogenesis / cytoplasmic translation / ubiquitin-dependent protein catabolic process / protein ubiquitination / structural constituent of ribosome / DNA damage response / ubiquitin protein ligase binding / ATP binding / metal ion binding / nucleus / cytosol / cytoplasm Similarity search - Function | ||||||
Biological species | Saccharomyces cerevisiae (brewer's yeast) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.032 Å | ||||||
Authors | Misra, M. / Schindelin, H. | ||||||
Funding support | Germany, 1items
| ||||||
Citation | Journal: Chemistry / Year: 2021 Title: Development of ADPribosyl Ubiquitin Analogues to Study Enzymes Involved in Legionella Infection. Authors: Kim, R.Q. / Misra, M. / Gonzalez, A. / Tomaskovic, I. / Shin, D. / Schindelin, H. / Filippov, D.V. / Ovaa, H. / Dikic, I. / van der Heden van Noort, G.J. | ||||||
History |
|
-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
---|
-Downloads & links
-Download
PDBx/mmCIF format | 6zqh.cif.gz | 1.2 MB | Display | PDBx/mmCIF format |
---|---|---|---|---|
PDB format | pdb6zqh.ent.gz | 1 MB | Display | PDB format |
PDBx/mmJSON format | 6zqh.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/zq/6zqh ftp://data.pdbj.org/pub/pdb/validation_reports/zq/6zqh | HTTPS FTP |
---|
-Related structure data
Related structure data | 3cmmS S: Starting model for refinement |
---|---|
Similar structure data |
-Links
-Assembly
Deposited unit |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
2 |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Unit cell |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
|