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Yorodumi- PDB-6x63: Atomic-Resolution Structure of HIV-1 Capsid Tubes by Magic Angle ... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6x63 | |||||||||||||||
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Title | Atomic-Resolution Structure of HIV-1 Capsid Tubes by Magic Angle Spinning NMR | |||||||||||||||
Components | HIV-1 capsid protein | |||||||||||||||
Keywords | VIRAL PROTEIN / magic angle spinning NMR / HIV-1 capsid / CA protein assemblies / HIV-AIDS | |||||||||||||||
Function / homology | Function and homology information viral budding via host ESCRT complex / host multivesicular body / ISG15 antiviral mechanism / viral nucleocapsid / viral translational frameshifting / host cell nucleus / host cell plasma membrane / structural molecule activity / virion membrane / RNA binding ...viral budding via host ESCRT complex / host multivesicular body / ISG15 antiviral mechanism / viral nucleocapsid / viral translational frameshifting / host cell nucleus / host cell plasma membrane / structural molecule activity / virion membrane / RNA binding / zinc ion binding / membrane Similarity search - Function | |||||||||||||||
Biological species | Human immunodeficiency virus 1 | |||||||||||||||
Method | SOLID-STATE NMR / data-guided molecular dynamics | |||||||||||||||
Authors | Lu, M. / Russell, R.W. / Bryer, A. / Quinn, C.M. / Hou, G. / Zhang, H. / Schwieters, C.D. / Perilla, J.R. / Gronenborn, A.M. / Polenova, T. | |||||||||||||||
Funding support | United States, 4items
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Citation | Journal: Nat.Struct.Mol.Biol. / Year: 2020 Title: Atomic-resolution structure of HIV-1 capsid tubes by magic-angle spinning NMR. Authors: Lu, M. / Russell, R.W. / Bryer, A.J. / Quinn, C.M. / Hou, G. / Zhang, H. / Schwieters, C.D. / Perilla, J.R. / Gronenborn, A.M. / Polenova, T. | |||||||||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6x63.cif.gz | 26.3 MB | Display | PDBx/mmCIF format |
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PDB format | pdb6x63.ent.gz | Display | PDB format | |
PDBx/mmJSON format | 6x63.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6x63_validation.pdf.gz | 2.5 MB | Display | wwPDB validaton report |
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Full document | 6x63_full_validation.pdf.gz | 3.3 MB | Display | |
Data in XML | 6x63_validation.xml.gz | 1.5 MB | Display | |
Data in CIF | 6x63_validation.cif.gz | 2.2 MB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/x6/6x63 ftp://data.pdbj.org/pub/pdb/validation_reports/x6/6x63 | HTTPS FTP |
-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 25630.426 Da / Num. of mol.: 378 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Human immunodeficiency virus 1 / Strain: NL4-3 / Gene: Gag-pol / Production host: Escherichia coli (E. coli) / References: UniProt: P12493 |
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-Experimental details
-Experiment
Experiment | Method: SOLID-STATE NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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