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- PDB-6trq: S.c. Scavenger Decapping Enzyme DcpS in complex with the capped R... -
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Open data
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Basic information
Entry | Database: PDB / ID: 6trq | |||||||||
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Title | S.c. Scavenger Decapping Enzyme DcpS in complex with the capped RNA dinucleotide m7G-GU | |||||||||
![]() | m7GpppX diphosphatase | |||||||||
![]() | HYDROLASE / mRNA decapping / mRNA degradation / decapping | |||||||||
Function / homology | ![]() exoribonuclease activator activity / m7G(5')pppN diphosphatase complex / nuclear-transcribed mRNA catabolic process, deadenylation-independent decay / 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase / 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity / mRNA decay by 3' to 5' exoribonuclease / deadenylation-dependent decapping of nuclear-transcribed mRNA / hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides / RNA 7-methylguanosine cap binding / nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay ...exoribonuclease activator activity / m7G(5')pppN diphosphatase complex / nuclear-transcribed mRNA catabolic process, deadenylation-independent decay / 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase / 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity / mRNA decay by 3' to 5' exoribonuclease / deadenylation-dependent decapping of nuclear-transcribed mRNA / hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides / RNA 7-methylguanosine cap binding / nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay / response to osmotic stress / nuclear-transcribed mRNA catabolic process / cellular response to starvation / response to nutrient / P-body / response to heat / response to oxidative stress / protein heterodimerization activity / perinuclear region of cytoplasm / protein homodimerization activity / mitochondrion / identical protein binding / nucleus / cytoplasm Similarity search - Function | |||||||||
Biological species | ![]() ![]() | |||||||||
Method | ![]() ![]() ![]() ![]() | |||||||||
![]() | Fuchs, A.-L. / Neu, A. / Sprangers, R. | |||||||||
Funding support | ![]()
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![]() | ![]() Title: Molecular basis of the selective processing of short mRNA substrates by the DcpS mRNA decapping enzyme. Authors: Fuchs, A.L. / Wurm, J.P. / Neu, A. / Sprangers, R. | |||||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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PDBx/mmCIF format | ![]() | 562.8 KB | Display | ![]() |
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PDB format | ![]() | 466.9 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Summary document | ![]() | 2.4 MB | Display | ![]() |
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Full document | ![]() | 2.4 MB | Display | |
Data in XML | ![]() | 51.5 KB | Display | |
Data in CIF | ![]() | 68.6 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 6gbsC ![]() 5bv3S S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Assembly
Deposited unit | ![]()
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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