- PDB-6sdk: Crystal structure of bacterial ParB dimer bound to CDP -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 6sdk
Title
Crystal structure of bacterial ParB dimer bound to CDP
Components
Stage 0 sporulation protein J
Keywords
DNA BINDING PROTEIN / ParB / Chromosome segregation / Chromosome organization
Function / homology
Function and homology information
positive regulation of sporulation resulting in formation of a cellular spore / bacterial nucleoid / sporulation resulting in formation of a cellular spore / chromosome segregation / chromosome / DNA binding Similarity search - Function
ParB/Spo0J, HTH domain / HTH domain found in ParB protein / ParB/RepB/Spo0J partition protein / ParB/Sulfiredoxin domain / ParB/Sulfiredoxin / ParB-like nuclease domain / ParB/Sulfiredoxin superfamily Similarity search - Domain/homology
Mass: 18.015 Da / Num. of mol.: 495 / Source method: isolated from a natural source / Formula: H2O
Has ligand of interest
N
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Experimental details
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Experiment
Experiment
Method: X-RAY DIFFRACTION / Number of used crystals: 1
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Sample preparation
Crystal
Density Matthews: 2.72 Å3/Da / Density % sol: 54.82 %
Crystal grow
Temperature: 277 K / Method: vapor diffusion, sitting drop Details: 5-16 % PEG 8000, 0.15-0.25 M calcium acetate or calcium chloride, and 50 mM Tris pH 7.5 or 8
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Data collection
Diffraction
Mean temperature: 100 K / Serial crystal experiment: N
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