+Open data
-Basic information
Entry | Database: PDB / ID: 6qlb | ||||||
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Title | Calpain small subunit 1, RNA-binding protein Hfq | ||||||
Components |
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Keywords | DNA BINDING PROTEIN / Calpain-1 / PEF(S) / Hfq / E.coli / Chaperone / Calcium binding / EF-Hand / Complex / 3D Structure Determination / Contamination / Contaminant / RNA binding / DNA binding / Cysteine / Protease / Nucleotide | ||||||
Function / homology | Function and homology information sRNA-mediated post-transcriptional gene silencing / positive regulation of translation, ncRNA-mediated / calpain complex / RNA folding chaperone / regulation of translation, ncRNA-mediated / bacterial nucleoid / bent DNA binding / regulation of RNA stability / calcium-dependent cysteine-type endopeptidase activity / Formation of the cornified envelope ...sRNA-mediated post-transcriptional gene silencing / positive regulation of translation, ncRNA-mediated / calpain complex / RNA folding chaperone / regulation of translation, ncRNA-mediated / bacterial nucleoid / bent DNA binding / regulation of RNA stability / calcium-dependent cysteine-type endopeptidase activity / Formation of the cornified envelope / tRNA processing / Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models / regulation of macroautophagy / Degradation of the extracellular matrix / tRNA binding / positive regulation of cell population proliferation / calcium ion binding / regulation of DNA-templated transcription / proteolysis / DNA binding / RNA binding / extracellular exosome / ATP binding / membrane / plasma membrane / cytosol Similarity search - Function | ||||||
Biological species | Homo sapiens (human) Escherichia coli (E. coli) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.32 Å | ||||||
Authors | Rizkallah, P.J. / Cresser-Brown, J.O. | ||||||
Citation | Journal: Acta Crystallogr.,Sect.F / Year: 2020 Title: Calpain small subunit 1, RNA-binding protein Hfq Authors: Rizkallah, P.J. / Cresser-Brown, J.O. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6qlb.cif.gz | 407.7 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6qlb.ent.gz | 334.9 KB | Display | PDB format |
PDBx/mmJSON format | 6qlb.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6qlb_validation.pdf.gz | 527 KB | Display | wwPDB validaton report |
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Full document | 6qlb_full_validation.pdf.gz | 548 KB | Display | |
Data in XML | 6qlb_validation.xml.gz | 37.7 KB | Display | |
Data in CIF | 6qlb_validation.cif.gz | 52.2 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/ql/6qlb ftp://data.pdbj.org/pub/pdb/validation_reports/ql/6qlb | HTTPS FTP |
-Related structure data
Related structure data | 4phjS S: Starting model for refinement |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Component-ID: _ / Refine code: _
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