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Yorodumi- PDB-6pez: SOLID-STATE NMR STRUCTURE OF PISCIDIN 3 IN ALIGNED 4:1 PHOSPHATID... -
+Open data
-Basic information
Entry | Database: PDB / ID: 6pez | ||||||
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Title | SOLID-STATE NMR STRUCTURE OF PISCIDIN 3 IN ALIGNED 4:1 PHOSPHATIDYLCHOLINE/CHOLESTEROL LIPID BILAYERS | ||||||
Components | Piscidin-3 | ||||||
Keywords | ANTIMICROBIAL PROTEIN / ANTIMICROBIAL PEPTIDE / ANTICANCER PEPTIDE / ANTI HIV-1 / CATIONIC / AMPHIPATHIC / HISTIDINE RICH / HELICAL / LIPID BILAYERS / BACTERIAL CELL MEMBRANE MIMIC | ||||||
Function / homology | Function and homology information regulation of defense response to virus / killing of cells of another organism / defense response to bacterium / innate immune response / lipid binding / extracellular region / membrane Similarity search - Function | ||||||
Biological species | Morone chrysops x Morone saxatilis (white bass x striped sea-bass) | ||||||
Method | SOLID-STATE NMR / simulated annealing | ||||||
Authors | Greenwood, A.I. / Cairns, L.S. / Fu, R. / Cotten, M.L. | ||||||
Funding support | United States, 1items
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Citation | Journal: J.Biol.Chem. / Year: 2019 Title: The host-defense peptide piscidin P1 reorganizes lipid domains in membranes and decreases activation energies in mechanosensitive ion channels. Authors: Comert, F. / Greenwood, A. / Maramba, J. / Acevedo, R. / Lucas, L. / Kulasinghe, T. / Cairns, L.S. / Wen, Y. / Fu, R. / Hammer, J. / Blazyk, J. / Sukharev, S. / Cotten, M.L. / Mihailescu, M. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6pez.cif.gz | 68.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6pez.ent.gz | 49.4 KB | Display | PDB format |
PDBx/mmJSON format | 6pez.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Summary document | 6pez_validation.pdf.gz | 454.9 KB | Display | wwPDB validaton report |
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Full document | 6pez_full_validation.pdf.gz | 492.5 KB | Display | |
Data in XML | 6pez_validation.xml.gz | 6.8 KB | Display | |
Data in CIF | 6pez_validation.cif.gz | 9.3 KB | Display | |
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/pe/6pez ftp://data.pdbj.org/pub/pdb/validation_reports/pe/6pez | HTTPS FTP |
-Related structure data
Related structure data | 6pf0C C: citing same article (ref.) |
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Similar structure data | |
Other databases |
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-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein/peptide | Mass: 2495.952 Da / Num. of mol.: 1 / Source method: obtained synthetically Source: (synth.) Morone chrysops x Morone saxatilis (white bass x striped sea-bass) References: UniProt: P0C006 |
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-Experimental details
-Experiment
Experiment | Method: SOLID-STATE NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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-Sample preparation
Details |
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