Entry | Database: PDB / ID: 6oi7 |
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Title | Se-Met structure of apo- Escherichia coli dGTPase |
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Components | Deoxyguanosinetriphosphate triphosphohydrolase |
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Keywords | METAL BINDING PROTEIN / E.coli dGTPase / Metalloenzymes / dNTP Triphosphohydrolase |
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Function / homology | Function and homology information
pyrimidine deoxyribonucleoside salvage / dGTPase / dGTPase activity / dGTP catabolic process / nucleobase-containing small molecule interconversion / cobalt ion binding / single-stranded DNA binding / manganese ion binding / GTPase activity / magnesium ion binding / identical protein bindingSimilarity search - Function Phosphohydrolase-associated domain / dNTP triphosphohydrolase, type 1 / Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily / dNTP triphosphohydrolase / Hypothetical protein af1432 / : / Hypothetical protein af1432 / HD domain profile. / HD domain / HD domain ...Phosphohydrolase-associated domain / dNTP triphosphohydrolase, type 1 / Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily / dNTP triphosphohydrolase / Hypothetical protein af1432 / : / Hypothetical protein af1432 / HD domain profile. / HD domain / HD domain / Metal dependent phosphohydrolases with conserved 'HD' motif. / HD/PDEase domain / Orthogonal Bundle / Mainly AlphaSimilarity search - Domain/homology |
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Biological species |  Escherichia coli (E. coli) |
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Method | X-RAY DIFFRACTION / SYNCHROTRON / SAD / Resolution: 2.9 Å |
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Authors | Calero, G. / Barnes, C.O. / Wu, Y. |
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Funding support | United States, 2items Organization | Grant number | Country |
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National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | R01GM112686 | United States | National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | R01GM116642 | United States |
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Citation | Journal: Proc.Natl.Acad.Sci.USA / Year: 2019 Title: The crystal structure of dGTPase reveals the molecular basis of dGTP selectivity. Authors: Barnes, C.O. / Wu, Y. / Song, J. / Lin, G. / Baxter, E.L. / Brewster, A.S. / Nagarajan, V. / Holmes, A. / Soltis, S.M. / Sauter, N.K. / Ahn, J. / Cohen, A.E. / Calero, G. |
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History | Deposition | Apr 8, 2019 | Deposition site: RCSB / Processing site: RCSB |
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Revision 1.0 | May 29, 2019 | Provider: repository / Type: Initial release |
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Revision 1.1 | Jan 1, 2020 | Group: Author supporting evidence / Category: pdbx_audit_support / Item: _pdbx_audit_support.funding_organization |
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Revision 1.2 | Nov 6, 2024 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Structure summary Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_entry_details / pdbx_modification_feature / struct_conn Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.conn_type_id / _struct_conn.id / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id |
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