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Open data
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Basic information
| Entry | Database: PDB / ID: 6nk1 | |||||||||
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| Title | EphA2 LBD in complex with bA-WLA-YRPKbio peptide | |||||||||
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Keywords | TRANSFERASE / protein-peptide interaction / kinase / ephrin / eph receptor / drug development / SIGNALING PROTEIN | |||||||||
| Function / homology | Function and homology informationbranching involved in mammary gland duct morphogenesis / lens fiber cell morphogenesis / cAMP metabolic process / regulation of blood vessel endothelial cell migration / leading edge membrane / mammary gland epithelial cell proliferation / ephrin receptor activity / bone remodeling / response to growth factor / positive regulation of bicellular tight junction assembly ...branching involved in mammary gland duct morphogenesis / lens fiber cell morphogenesis / cAMP metabolic process / regulation of blood vessel endothelial cell migration / leading edge membrane / mammary gland epithelial cell proliferation / ephrin receptor activity / bone remodeling / response to growth factor / positive regulation of bicellular tight junction assembly / regulation of lamellipodium assembly / negative regulation of cell adhesion mediated by integrin / EPH-Ephrin signaling / RND1 GTPase cycle / RND2 GTPase cycle / RND3 GTPase cycle / tight junction / RHOV GTPase cycle / EPHA-mediated growth cone collapse / growth factor binding / RHOU GTPase cycle / keratinocyte differentiation / lamellipodium membrane / RHOG GTPase cycle / EPH-ephrin mediated repulsion of cells / regulation of angiogenesis / RAC3 GTPase cycle / RAC2 GTPase cycle / ephrin receptor signaling pathway / regulation of ERK1 and ERK2 cascade / osteoclast differentiation / RAC1 GTPase cycle / transmembrane receptor protein tyrosine kinase activity / cell surface receptor protein tyrosine kinase signaling pathway / protein localization to plasma membrane / cell motility / molecular function activator activity / positive regulation of protein localization to plasma membrane / intrinsic apoptotic signaling pathway in response to DNA damage / cell chemotaxis / receptor protein-tyrosine kinase / cell junction / osteoblast differentiation / ruffle membrane / cell migration / lamellipodium / angiogenesis / virus receptor activity / signaling receptor complex / cell adhesion / positive regulation of cell migration / cadherin binding / focal adhesion / cell surface / ATP binding / plasma membrane Similarity search - Function | |||||||||
| Biological species | Homo sapiens (human)synthetic construct (others) | |||||||||
| Method | X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / molecular replacement / Resolution: 1.55 Å | |||||||||
Authors | Lechtenberg, B.C. / Pasquale, E.B. | |||||||||
| Funding support | United States, 2items
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Citation | Journal: J.Biol.Chem. / Year: 2019Title: Engineering nanomolar peptide ligands that differentially modulate EphA2 receptor signaling. Authors: Gomez-Soler, M. / Petersen Gehring, M. / Lechtenberg, B.C. / Zapata-Mercado, E. / Hristova, K. / Pasquale, E.B. | |||||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 6nk1.cif.gz | 308.4 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb6nk1.ent.gz | 209.8 KB | Display | PDB format |
| PDBx/mmJSON format | 6nk1.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/nk/6nk1 ftp://data.pdbj.org/pub/pdb/validation_reports/nk/6nk1 | HTTPS FTP |
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-Related structure data
| Related structure data | ![]() 6njzSC ![]() 6nk0C ![]() 6nk2C ![]() 6nkpC S: Starting model for refinement C: citing same article ( |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Unit cell |
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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Movie
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Components
About Yorodumi




Homo sapiens (human)
X-RAY DIFFRACTION
United States, 2items
Citation













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