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- PDB-6nd9: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH CALCIUM -
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Open data
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Basic information
Entry | Database: PDB / ID: 6nd9 | ||||||
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Title | RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN WITH CALCIUM | ||||||
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![]() | CELL ADHESION/TOXIN / C-TYPE LECTIN / INTEGRIN / VENOM / COAGULATION / CELL ADHESION / CELL ADHESION-TOXIN complex | ||||||
Function / homology | ![]() disruption of cell wall in another organism / collagen receptor activity / substrate-dependent cell migration / positive regulation of transmission of nerve impulse / positive regulation of cell projection organization / collagen binding involved in cell-matrix adhesion / integrin alpha2-beta1 complex / response to parathyroid hormone / hypotonic response / response to L-ascorbic acid ...disruption of cell wall in another organism / collagen receptor activity / substrate-dependent cell migration / positive regulation of transmission of nerve impulse / positive regulation of cell projection organization / collagen binding involved in cell-matrix adhesion / integrin alpha2-beta1 complex / response to parathyroid hormone / hypotonic response / response to L-ascorbic acid / oligosaccharide binding / skin morphogenesis / CHL1 interactions / Laminin interactions / basal part of cell / positive regulation of smooth muscle contraction / positive regulation of phagocytosis, engulfment / collagen-activated signaling pathway / peptidoglycan binding / mammary gland development / Platelet Adhesion to exposed collagen / hepatocyte differentiation / mesodermal cell differentiation / focal adhesion assembly / heparan sulfate proteoglycan binding / response to muscle activity / integrin complex / positive regulation of positive chemotaxis / positive regulation of leukocyte migration / MET activates PTK2 signaling / cell adhesion mediated by integrin / Syndecan interactions / cell-substrate adhesion / positive regulation of epithelial cell migration / positive regulation of smooth muscle cell migration / response to amine / positive regulation of cell adhesion / ECM proteoglycans / positive regulation of collagen biosynthetic process / Integrin cell surface interactions / detection of mechanical stimulus involved in sensory perception of pain / axon terminus / laminin binding / collagen binding / cell-matrix adhesion / cellular response to estradiol stimulus / positive regulation of translation / integrin-mediated signaling pathway / female pregnancy / animal organ morphogenesis / positive regulation of smooth muscle cell proliferation / response to peptide hormone / cell-cell adhesion / cellular response to mechanical stimulus / antimicrobial humoral immune response mediated by antimicrobial peptide / blood coagulation / integrin binding / virus receptor activity / signaling receptor activity / amyloid-beta binding / toxin activity / collagen-containing extracellular matrix / cell adhesion / response to hypoxia / response to xenobiotic stimulus / external side of plasma membrane / focal adhesion / positive regulation of cell population proliferation / protein-containing complex binding / perinuclear region of cytoplasm / cell surface / extracellular space / metal ion binding / plasma membrane Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() | ||||||
![]() | Stetefeld, J. / McDougall, M.D. / Loewen, P.C. | ||||||
![]() | ![]() Title: RHODOCETIN IN COMPLEX WITH THE INTEGRIN ALPHA2-A DOMAIN AND CALCIUM Authors: Stetefeld, J. / McDougall, M.D. / Loewen, P.C. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 541.5 KB | Display | ![]() |
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PDB format | ![]() | 443.8 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 599.4 KB | Display | ![]() |
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Full document | ![]() | 633.3 KB | Display | |
Data in XML | ![]() | 90.1 KB | Display | |
Data in CIF | ![]() | 123 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Related structure data | ![]() 5thpS S: Starting model for refinement |
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Similar structure data |
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Assembly
Deposited unit | ![]()
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
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