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- PDB-6nbn: Structure of Aedes aegypti OBP22 in the complex with arachidonic acid -
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Open data
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Basic information
Entry | Database: PDB / ID: 6nbn | ||||||
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Title | Structure of Aedes aegypti OBP22 in the complex with arachidonic acid | ||||||
![]() | AAEL005772-PA | ||||||
![]() | TRANSPORT PROTEIN / Odorant binding protein Chemo-sensory signaling Lipid binding | ||||||
Function / homology | ![]() odorant binding / sensory perception of smell / lipid binding / extracellular space Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | SOLUTION NMR / simulated annealing | ||||||
![]() | Jones, D.N. / Wang, J. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Aedes aegypti Odorant Binding Protein 22 selectively binds fatty acids through a conformational change in its C-terminal tail. Authors: Wang, J. / Murphy, E.J. / Nix, J.C. / Jones, D.N.M. | ||||||
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 1.1 MB | Display | ![]() |
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PDB format | ![]() | 987.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 6og0C ![]() 6oghC ![]() 6oiiC ![]() 6omwC ![]() 6opbC ![]() 6otlC ![]() 6p2eC C: citing same article ( |
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Similar structure data | |
Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 14400.319 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() |
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#2: Chemical | ChemComp-ACD / |
-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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Sample |
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Sample conditions | Ionic strength: 20 mM / Ionic strength err: 0.2 / Pressure: 820 mbar / Temperature: 298 K / Temperature err: 1
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-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 3 Details: Structure were determined using the unambiguous assignment protocol in Aria2 using a final total of 2381 restraint of which 1998 were NOE based | ||||||||||||||||||||
NMR representative | Selection criteria: medoid | ||||||||||||||||||||
NMR ensemble | Conformer selection criteria: NOE violation energy / Conformers calculated total number: 50 / Conformers submitted total number: 30 |