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Yorodumi- PDB-6mc1: Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethy... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 6mc1 | |||||||||
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| Title | Structure of MAP kinase phosphatase 5 in complex with 3,3-dimethyl-1-((9-(methylthio)-5,6-dihydrothieno[3,4-h]quinazolin-2-yl)thio)butan-2-one, an allosteric inhibitor | |||||||||
Components | Dual specificity protein phosphatase 10 | |||||||||
Keywords | Hydrolase/Hydrolase Inhibitor / phosphatase / protein-tyrosine phosphatase / dual specificity phosphatase / phosphatase-inhibitor complex / HYDROLASE-HYDROLASE Inhibitor complex | |||||||||
| Function / homology | Function and homology informationnegative regulation of epithelium regeneration / MAP kinase phosphatase activity / protein tyrosine/threonine phosphatase activity / MAP kinase tyrosine phosphatase activity / MAP kinase tyrosine/serine/threonine phosphatase activity / regulation of adaptive immune response / regulation of brown fat cell differentiation / negative regulation of epithelial cell migration / negative regulation of p38MAPK cascade / negative regulation of oligodendrocyte differentiation ...negative regulation of epithelium regeneration / MAP kinase phosphatase activity / protein tyrosine/threonine phosphatase activity / MAP kinase tyrosine phosphatase activity / MAP kinase tyrosine/serine/threonine phosphatase activity / regulation of adaptive immune response / regulation of brown fat cell differentiation / negative regulation of epithelial cell migration / negative regulation of p38MAPK cascade / negative regulation of oligodendrocyte differentiation / Signaling by MAPK mutants / RAF-independent MAPK1/3 activation / JUN kinase binding / dephosphorylation / negative regulation of stress-activated MAPK cascade / negative regulation of JNK cascade / positive regulation of regulatory T cell differentiation / mitogen-activated protein kinase p38 binding / protein-serine/threonine phosphatase / protein serine/threonine phosphatase activity / phosphatase activity / oligodendrocyte differentiation / negative regulation of respiratory burst involved in inflammatory response / stress-activated MAPK cascade / protein-tyrosine-phosphatase / negative regulation of cell migration / negative regulation of ERK1 and ERK2 cascade / negative regulation of epithelial cell proliferation / Negative regulation of MAPK pathway / response to lipopolysaccharide / signal transduction / nucleoplasm / nucleus / cytoplasm / cytosol Similarity search - Function | |||||||||
| Biological species | Homo sapiens (human) | |||||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.7 Å | |||||||||
Authors | Gannam, Z.T.K. / Anderson, K.S. / Bennett, A.M. / Lolis, E. | |||||||||
| Funding support | United States, 2items
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Citation | Journal: Sci.Signal. / Year: 2020Title: An allosteric site on MKP5 reveals a strategy for small-molecule inhibition. Authors: Gannam, Z.T.K. / Min, K. / Shillingford, S.R. / Zhang, L. / Herrington, J. / Abriola, L. / Gareiss, P.C. / Pantouris, G. / Tzouvelekis, A. / Kaminski, N. / Zhang, X. / Yu, J. / Jamali, H. / ...Authors: Gannam, Z.T.K. / Min, K. / Shillingford, S.R. / Zhang, L. / Herrington, J. / Abriola, L. / Gareiss, P.C. / Pantouris, G. / Tzouvelekis, A. / Kaminski, N. / Zhang, X. / Yu, J. / Jamali, H. / Ellman, J.A. / Lolis, E. / Anderson, K.S. / Bennett, A.M. | |||||||||
| History |
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 6mc1.cif.gz | 375.2 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb6mc1.ent.gz | 311.2 KB | Display | PDB format |
| PDBx/mmJSON format | 6mc1.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 6mc1_validation.pdf.gz | 2.1 MB | Display | wwPDB validaton report |
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| Full document | 6mc1_full_validation.pdf.gz | 2.1 MB | Display | |
| Data in XML | 6mc1_validation.xml.gz | 33.4 KB | Display | |
| Data in CIF | 6mc1_validation.cif.gz | 42.3 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/mc/6mc1 ftp://data.pdbj.org/pub/pdb/validation_reports/mc/6mc1 | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 1zzwS S: Starting model for refinement |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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About Yorodumi



Homo sapiens (human)
X-RAY DIFFRACTION
United States, 2items
Citation










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