- PDB-6fco: Structural and functional characterisation of Frataxin (FXN) like... -
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ID or keywords:
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Basic information
Entry
Database: PDB / ID: 6fco
Title
Structural and functional characterisation of Frataxin (FXN) like protein from Chaetomium thermophilum
Components
Mitochondrial frataxin-like protein
Keywords
TRANSPORT PROTEIN / iron sulphur cluster / iron chaperone / Friedreich's ataxia
Function / homology
Function and homology information
iron-sulfur cluster assembly / heme biosynthetic process / ferroxidase / ferroxidase activity / monoatomic ion transport / ferric iron binding / intracellular iron ion homeostasis / mitochondrion Similarity search - Function
Frataxin/CyaY / Frataxin / Metal Transport, Frataxin; Chain A / Frataxin/CyaY / Frataxin conserved site / Frataxin-like domain / Frataxin family signature. / Frataxin family profile. / Frataxin-like domain / Frataxin/CyaY superfamily ...Frataxin/CyaY / Frataxin / Metal Transport, Frataxin; Chain A / Frataxin/CyaY / Frataxin conserved site / Frataxin-like domain / Frataxin family signature. / Frataxin family profile. / Frataxin-like domain / Frataxin/CyaY superfamily / 2-Layer Sandwich / Alpha Beta Similarity search - Domain/homology
A: Mitochondrial frataxin-like protein B: Mitochondrial frataxin-like protein C: Mitochondrial frataxin-like protein D: Mitochondrial frataxin-like protein E: Mitochondrial frataxin-like protein F: Mitochondrial frataxin-like protein hetero molecules
Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelength
Wavelength: 0.96861 Å / Relative weight: 1
Reflection
Resolution: 2.03→80.29 Å / Num. obs: 48810 / % possible obs: 100 % / Redundancy: 1 % / Biso Wilson estimate: 33.45 Å2 / CC1/2: 1 / Rmerge(I) obs: 0.079 / Net I/σ(I): 15.1
Reflection shell
Resolution: 2.03→2.106 Å / Num. unique obs: 48810 / Rpim(I) all: 0.8 / % possible all: 100
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Processing
Software
Name
Version
Classification
REFMAC
5.8.0158
refinement
iMOSFLM
7.2.1
datareduction
SCALA
datascaling
PHASER
phasing
Refinement
Method to determine structure: SAD / Resolution: 2.03→80.29 Å / Cor.coef. Fo:Fc: 0.955 / Cor.coef. Fo:Fc free: 0.949 / Cross valid method: THROUGHOUT / ESU R: 0.211 / ESU R Free: 0.183 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.25956
2444
5 %
RANDOM
Rwork
0.21876
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obs
0.22079
46368
99.96 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK