- PDB-5zyb: Crystal structure of MOX-1 complexed with a boronic acid transiti... -
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ID or keywords:
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Basic information
Entry
Database: PDB / ID: 5zyb
Title
Crystal structure of MOX-1 complexed with a boronic acid transition state inhibitor S02030
Components
Beta-lactamase
Keywords
HYDROLASE / serine beta-lactamase / inhibitor
Function / homology
Function and homology information
antibiotic catabolic process / beta-lactamase activity / beta-lactamase / outer membrane-bounded periplasmic space / response to antibiotic / metal ion binding Similarity search - Function
Beta-lactamase, class-C active site / Beta-lactamase class-C active site. / Beta-lactamase-related / Beta-lactamase / Beta-lactamase / DD-peptidase/beta-lactamase superfamily / Beta-lactamase/transpeptidase-like / 3-Layer(aba) Sandwich / Alpha Beta Similarity search - Domain/homology
Resolution: 2.13→42.69 Å / Cor.coef. Fo:Fc: 0.955 / Cor.coef. Fo:Fc free: 0.927 / SU B: 4.046 / SU ML: 0.107 / Cross valid method: THROUGHOUT / ESU R: 0.212 / ESU R Free: 0.173 / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.2048
957
4.8 %
RANDOM
Rwork
0.15753
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obs
0.15979
19050
99.84 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å