Entry Database : PDB / ID : 5zk4 Structure visualization Downloads & linksTitle The structure of DSZS acyltransferase with carrier protein Components Details Keywords TRANSFERASE / ACYL CARRIER PROTEIN / POLYKETIDE BIOSYNTHESISFunction / homology Function and homology informationFunction Domain/homology Component
[acyl-carrier-protein] S-malonyltransferase / [acyl-carrier-protein] S-malonyltransferase activity / DIM/DIP cell wall layer assembly / fatty acid synthase activity / phosphopantetheine binding / 3-oxoacyl-[acyl-carrier-protein] synthase activity / fatty acid biosynthetic process / metal ion binding / plasma membrane / cytosol / cytoplasm Similarity search - Function PfaD family protein / : / [Acyl-carrier-protein] S-malonyltransferase, inserted helical domain / : / Beta-ketoacyl synthase-like, N-terminal / Malonyl CoA-acyl carrier protein transacylase, FabD-type / : / : / Malonyl-CoA ACP transacylase, ACP-binding / RhiE-like, KS-MAT linker domain ... PfaD family protein / : / [Acyl-carrier-protein] S-malonyltransferase, inserted helical domain / : / Beta-ketoacyl synthase-like, N-terminal / Malonyl CoA-acyl carrier protein transacylase, FabD-type / : / : / Malonyl-CoA ACP transacylase, ACP-binding / RhiE-like, KS-MAT linker domain / Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 / Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 / CurL-like, PKS C-terminal / Methyltransferase type 12 / Methyltransferase domain / : / Polyketide synthase dehydratase N-terminal domain / Polyketide synthase, dehydratase domain / PKS_DH / : / Polyketide synthase dehydratase domain / PKS_PP_betabranch / : / Polyketide and metazoan fatty acid synthase dehydratase (PKS/mFAS DH) domain profile. / Polyketide synthase, dehydratase domain superfamily / Polyketide synthase, C-terminal extension / Ketoacyl-synthetase C-terminal extension / Polyketide synthase, ketoreductase domain / KR domain / Malonyl-CoA ACP transacylase, ACP-binding / : / Acyl transferase / Acyl transferase domain / Acyl transferase domain in polyketide synthase (PKS) enzymes. / Acyl transferase domain superfamily / Acyl transferase/acyl hydrolase/lysophospholipase / Polyketide synthase, phosphopantetheine-binding domain / Phosphopantetheine attachment site / Beta-ketoacyl synthase, active site / Ketosynthase family 3 (KS3) active site signature. / PKS_KR / Beta-ketoacyl synthase / Ketosynthase family 3 (KS3) domain profile. / Beta-ketoacyl synthase, N-terminal / Beta-ketoacyl synthase, C-terminal / Polyketide synthase, beta-ketoacyl synthase domain / Beta-ketoacyl synthase, N-terminal domain / Beta-ketoacyl synthase, C-terminal domain / Thiolase-like / Phosphopantetheine attachment site / Phosphopantetheine attachment site. / Phosphopantetheine attachment site / ACP-like superfamily / Carrier protein (CP) domain profile. / Phosphopantetheine binding ACP domain / Aldolase-type TIM barrel / Alpha-Beta Plaits / NAD(P)-binding domain superfamily / S-adenosyl-L-methionine-dependent methyltransferase superfamily / 2-Layer Sandwich / 3-Layer(aba) Sandwich / Alpha Beta Similarity search - Domain/homologyBiological species Sorangium cellulosum (bacteria)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 2.03 Å DetailsAuthors Miyanaga, A. / Ouchi, R. / Kudo, F. / Eguchi, T. Funding support Japan, 1items Details Hide detailsOrganization Grant number Country Japan Society for the Promotion of Science 17K07747 Japan
CitationJournal : J. Am. Chem. Soc. / Year : 2018Title : Structural basis of protein-protein interactions between a trans-acting acyltransferase and acyl carrier protein in polyketide disorazole biosynthesisAuthors : Miyanaga, A. / Ouchi, R. / Ishikawa, F. / Goto, E. / Tanabe, G. / Kudo, F. / Eguchi, T. History Deposition Mar 23, 2018 Deposition site : PDBJ / Processing site : PDBJRevision 1.0 Jun 13, 2018 Provider : repository / Type : Initial releaseRevision 1.1 Jun 20, 2018 Group : Data collection / Database references / Category : citationItem : _citation.journal_abbrev / _citation.pdbx_database_id_PubMedRevision 1.2 Jul 4, 2018 Group : Data collection / Database references / Category : citationItem : _citation.journal_id_CSD / _citation.journal_id_ISSN ... _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last Revision 1.3 Nov 22, 2023 Group : Data collection / Database references ... Data collection / Database references / Derived calculations / Refinement description Category : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession ... _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id Revision 1.4 Nov 13, 2024 Group : Structure summary / Category : pdbx_entry_details / pdbx_modification_feature
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