- PDB-5yoy: Crystal structure of the human tumor necrosis factor in complex w... -
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Basic information
Entry
Database: PDB / ID: 5yoy
Title
Crystal structure of the human tumor necrosis factor in complex with golimumab Fv
Components
Golimumab heavy chain variable region
Golimumab light chain variable region
Tumor necrosis factor
Keywords
IMMUNE SYSTEM / Cytokine / Antibody
Function / homology
Function and homology information
response to Gram-negative bacterium / negative regulation of L-glutamate import across plasma membrane / negative regulation of bile acid secretion / positive regulation of interleukin-33 production / positive regulation of neutrophil activation / response to quercetin / negative regulation of branching involved in lung morphogenesis / positive regulation of fractalkine production / positive regulation of blood microparticle formation / response to 3,3',5-triiodo-L-thyronine ...response to Gram-negative bacterium / negative regulation of L-glutamate import across plasma membrane / negative regulation of bile acid secretion / positive regulation of interleukin-33 production / positive regulation of neutrophil activation / response to quercetin / negative regulation of branching involved in lung morphogenesis / positive regulation of fractalkine production / positive regulation of blood microparticle formation / response to 3,3',5-triiodo-L-thyronine / positive regulation of protein transport / positive regulation of vitamin D biosynthetic process / chronic inflammatory response to antigenic stimulus / regulation of endothelial cell apoptotic process / endothelial cell apoptotic process / response to macrophage colony-stimulating factor / negative regulation of myelination / positive regulation of leukocyte adhesion to arterial endothelial cell / response to gold nanoparticle / negative regulation of vascular wound healing / negative regulation of cytokine production involved in immune response / Differentiation of naive CD4+ T cells to T helper 1 cells (Th1 cells) / negative regulation of amyloid-beta clearance / positive regulation of podosome assembly / response to resveratrol / positive regulation of hair follicle development / inflammatory response to wounding / positive regulation of interleukin-18 production / positive regulation of hepatocyte proliferation / positive regulation of action potential / toll-like receptor 3 signaling pathway / TNF signaling / embryonic digestive tract development / negative regulation of D-glucose import across plasma membrane / vascular endothelial growth factor production / positive regulation of fever generation / positive regulation of calcineurin-NFAT signaling cascade / positive regulation of protein localization to cell surface / response to fructose / negative regulation of mitotic cell cycle / leukocyte tethering or rolling / necroptotic signaling pathway / positive regulation of synoviocyte proliferation / regulation of establishment of endothelial barrier / positive regulation of mononuclear cell migration / negative regulation of oxidative phosphorylation / macrophage activation involved in immune response / response to hydrogen sulfide / positive regulation of glial cell proliferation / positive regulation of protein-containing complex disassembly / positive regulation of osteoclast differentiation / cellular response to toxic substance / positive regulation of macrophage derived foam cell differentiation / regulation of fat cell differentiation / positive regulation of chemokine (C-X-C motif) ligand 2 production / tumor necrosis factor receptor binding / positive regulation of heterotypic cell-cell adhesion / positive regulation of membrane protein ectodomain proteolysis / negative regulation of systemic arterial blood pressure / response to L-glutamate / positive regulation of extrinsic apoptotic signaling pathway / positive regulation of leukocyte adhesion to vascular endothelial cell / regulation of canonical NF-kappaB signal transduction / regulation of reactive oxygen species metabolic process / TNFR1-induced proapoptotic signaling / negative regulation of fat cell differentiation / positive regulation of cytokine production involved in inflammatory response / positive regulation of programmed cell death / TNFR1-mediated ceramide production / negative regulation of heart rate / negative regulation of viral genome replication / positive regulation of DNA biosynthetic process / positive regulation of amyloid-beta formation / positive regulation of neuroinflammatory response / extrinsic apoptotic signaling pathway via death domain receptors / negative regulation of endothelial cell proliferation / negative regulation of interleukin-6 production / positive regulation of immunoglobulin production / negative regulation of bicellular tight junction assembly / response to isolation stress / Interleukin-10 signaling / regulation of synapse organization / negative regulation of apoptotic signaling pathway / regulation of insulin secretion / histone H3K9ac reader activity / negative regulation of blood vessel endothelial cell migration / negative regulation of lipid storage / response to salt stress / negative regulation of extrinsic apoptotic signaling pathway in absence of ligand / detection of mechanical stimulus involved in sensory perception of pain / negative regulation of osteoblast differentiation / negative regulation of lipid catabolic process / extrinsic apoptotic signaling pathway / positive regulation of synaptic transmission / positive regulation of vascular associated smooth muscle cell proliferation / regulation of synaptic transmission, glutamatergic / cellular response to retinoic acid / cell surface receptor signaling pathway via JAK-STAT / positive regulation of chemokine production / phagocytic cup Similarity search - Function