- PDB-5yoy: Crystal structure of the human tumor necrosis factor in complex w... -
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Basic information
Entry
Database: PDB / ID: 5yoy
Title
Crystal structure of the human tumor necrosis factor in complex with golimumab Fv
Components
Golimumab heavy chain variable region
Golimumab light chain variable region
Tumor necrosis factor
Keywords
IMMUNE SYSTEM / Cytokine / Antibody
Function / homology
Function and homology information
response to Gram-negative bacterium / negative regulation of L-glutamate import across plasma membrane / negative regulation of bile acid secretion / positive regulation of interleukin-33 production / positive regulation of neutrophil activation / response to quercetin / negative regulation of branching involved in lung morphogenesis / positive regulation of fractalkine production / positive regulation of blood microparticle formation / positive regulation of protein transport ...response to Gram-negative bacterium / negative regulation of L-glutamate import across plasma membrane / negative regulation of bile acid secretion / positive regulation of interleukin-33 production / positive regulation of neutrophil activation / response to quercetin / negative regulation of branching involved in lung morphogenesis / positive regulation of fractalkine production / positive regulation of blood microparticle formation / positive regulation of protein transport / positive regulation of vitamin D biosynthetic process / chronic inflammatory response to antigenic stimulus / regulation of endothelial cell apoptotic process / endothelial cell apoptotic process / response to 3,3',5-triiodo-L-thyronine / response to macrophage colony-stimulating factor / negative regulation of myelination / positive regulation of leukocyte adhesion to arterial endothelial cell / response to gold nanoparticle / negative regulation of vascular wound healing / Differentiation of naive CD4+ T cells to T helper 1 cells (Th1 cells) / negative regulation of cytokine production involved in immune response / negative regulation of amyloid-beta clearance / positive regulation of podosome assembly / response to resveratrol / positive regulation of hair follicle development / positive regulation of interleukin-18 production / inflammatory response to wounding / positive regulation of hepatocyte proliferation / negative regulation of bicellular tight junction assembly / positive regulation of action potential / toll-like receptor 3 signaling pathway / TNF signaling / embryonic digestive tract development / vascular endothelial growth factor production / negative regulation of D-glucose import across plasma membrane / positive regulation of fever generation / positive regulation of calcineurin-NFAT signaling cascade / response to fructose / positive regulation of protein localization to cell surface / leukocyte tethering or rolling / negative regulation of mitotic cell cycle / necroptotic signaling pathway / positive regulation of synoviocyte proliferation / regulation of establishment of endothelial barrier / negative regulation of oxidative phosphorylation / positive regulation of mononuclear cell migration / macrophage activation involved in immune response / response to hydrogen sulfide / positive regulation of glial cell proliferation / positive regulation of protein-containing complex disassembly / positive regulation of osteoclast differentiation / cellular response to toxic substance / positive regulation of macrophage derived foam cell differentiation / tumor necrosis factor receptor binding / regulation of fat cell differentiation / positive regulation of chemokine (C-X-C motif) ligand 2 production / positive regulation of heterotypic cell-cell adhesion / positive regulation of membrane protein ectodomain proteolysis / negative regulation of systemic arterial blood pressure / response to L-glutamate / positive regulation of extrinsic apoptotic signaling pathway / positive regulation of leukocyte adhesion to vascular endothelial cell / regulation of canonical NF-kappaB signal transduction / TNFR1-induced proapoptotic signaling / regulation of reactive oxygen species metabolic process / negative regulation of fat cell differentiation / positive regulation of cytokine production involved in inflammatory response / positive regulation of programmed cell death / TNFR1-mediated ceramide production / negative regulation of viral genome replication / negative regulation of heart rate / positive regulation of neuroinflammatory response / positive regulation of amyloid-beta formation / positive regulation of DNA biosynthetic process / extrinsic apoptotic signaling pathway via death domain receptors / positive regulation of immunoglobulin production / negative regulation of endothelial cell proliferation / negative regulation of interleukin-6 production / Interleukin-10 signaling / regulation of synapse organization / response to isolation stress / regulation of insulin secretion / negative regulation of apoptotic signaling pathway / histone H3K9ac reader activity / negative regulation of blood vessel endothelial cell migration / response to salt stress / negative regulation of lipid storage / lipopolysaccharide-mediated signaling pathway / negative regulation of extrinsic apoptotic signaling pathway in absence of ligand / detection of mechanical stimulus involved in sensory perception of pain / liver regeneration / negative regulation of lipid catabolic process / negative regulation of osteoblast differentiation / extrinsic apoptotic signaling pathway / positive regulation of vascular associated smooth muscle cell proliferation / positive regulation of synaptic transmission / cellular response to retinoic acid / cell surface receptor signaling pathway via JAK-STAT / regulation of synaptic transmission, glutamatergic Similarity search - Function