登録情報 | データベース: PDB / ID: 5yjo |
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タイトル | Crystal structure of SmyD3 in complex with covalent inhibitor 4 |
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要素 | Histone-lysine N-methyltransferase SMYD3 |
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キーワード | TRANSFERASE/INHIBITOR / covalent inhibitor / methyltransferase / methyltransferase inhibitor / TRANSFERASE-INHIBITOR complex |
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機能・相同性 | 機能・相同性情報
histone H3K36 dimethyltransferase activity / histone H4 methyltransferase activity / [histone H3]-lysine4 N-trimethyltransferase / myotube cell development / histone H3K4 trimethyltransferase activity / RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding / RNA polymerase II complex binding / cellular response to dexamethasone stimulus / establishment of protein localization / PKMTs methylate histone lysines ...histone H3K36 dimethyltransferase activity / histone H4 methyltransferase activity / [histone H3]-lysine4 N-trimethyltransferase / myotube cell development / histone H3K4 trimethyltransferase activity / RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding / RNA polymerase II complex binding / cellular response to dexamethasone stimulus / establishment of protein localization / PKMTs methylate histone lysines / nucleosome assembly / positive regulation of peptidyl-serine phosphorylation / methylation / RNA polymerase II cis-regulatory region sequence-specific DNA binding / positive regulation of transcription by RNA polymerase II / nucleoplasm / nucleus / metal ion binding / cytosol類似検索 - 分子機能 Annexin V; domain 1 - #160 / Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat - #970 / Helix Hairpins - #2220 / Histone-lysine N-methyltransferase Smyd3 / SMYD3, SET domain / Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. / MYND finger / Zinc finger, MYND-type / Zinc finger MYND-type signature. / Zinc finger MYND-type profile. ...Annexin V; domain 1 - #160 / Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat - #970 / Helix Hairpins - #2220 / Histone-lysine N-methyltransferase Smyd3 / SMYD3, SET domain / Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. / MYND finger / Zinc finger, MYND-type / Zinc finger MYND-type signature. / Zinc finger MYND-type profile. / Annexin V; domain 1 / Beta-clip-like / SET domain / Tetratricopeptide repeat domain / Helix Hairpins / SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain / SET domain superfamily / SET domain / SET domain profile. / SET domain / Beta Complex / Helix non-globular / Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat / Special / Alpha Horseshoe / Tetratricopeptide-like helical domain superfamily / Orthogonal Bundle / Mainly Beta / Mainly Alpha類似検索 - ドメイン・相同性 Chem-8W0 / S-ADENOSYLMETHIONINE / Histone-lysine N-methyltransferase SMYD3類似検索 - 構成要素 |
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生物種 | Homo sapiens (ヒト) |
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手法 | X線回折 / 分子置換 / 解像度: 2.135 Å |
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データ登録者 | Baburajendran, N. / Anna E, J. |
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引用 | ジャーナル: Acs Med.Chem.Lett. / 年: 2019 タイトル: Discovery of Irreversible Inhibitors Targeting Histone Methyltransferase, SMYD3. 著者: Huang, C. / Liew, S.S. / Lin, G.R. / Poulsen, A. / Ang, M.J.Y. / Chia, B.C.S. / Chew, S.Y. / Kwek, Z.P. / Wee, J.L.K. / Ong, E.H. / Retna, P. / Baburajendran, N. / Li, R. / Yu, W. / Koh- ...著者: Huang, C. / Liew, S.S. / Lin, G.R. / Poulsen, A. / Ang, M.J.Y. / Chia, B.C.S. / Chew, S.Y. / Kwek, Z.P. / Wee, J.L.K. / Ong, E.H. / Retna, P. / Baburajendran, N. / Li, R. / Yu, W. / Koh-Stenta, X. / Ngo, A. / Manesh, S. / Fulwood, J. / Ke, Z. / Chung, H.H. / Sepramaniam, S. / Chew, X.H. / Dinie, N. / Lee, M.A. / Chew, Y.S. / Low, C.B. / Pendharkar, V. / Manoharan, V. / Vuddagiri, S. / Sangthongpitag, K. / Joy, J. / Matter, A. / Hill, J. / Keller, T.H. / Foo, K. |
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履歴 | 登録 | 2017年10月11日 | 登録サイト: PDBJ / 処理サイト: PDBJ |
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改定 1.0 | 2018年10月17日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2019年7月10日 | Group: Advisory / Data collection ...Advisory / Data collection / Database references / Derived calculations カテゴリ: citation / citation_author ...citation / citation_author / pdbx_validate_close_contact / struct_conn / struct_conn_type Item: _citation.country / _citation.journal_abbrev ..._citation.country / _citation.journal_abbrev / _citation.journal_id_CSD / _citation.journal_id_ISSN / _citation.journal_volume / _citation.page_first / _citation.page_last / _citation.pdbx_database_id_DOI / _citation.pdbx_database_id_PubMed / _citation.title / _citation.year |
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