Entry Database : PDB / ID : 5yac Structure visualization Downloads & linksTitle Crystal structure of WT Trm5b from Pyrococcus abyssi ComponentstRNA (guanine(37)-N1)-methyltransferase Trm5b Details Keywords RNA BINDING PROTEIN / tRNA Methyltransferase / open conformation / wyosine biosynthesis / tRNA maturationFunction / homology Function and homology informationFunction Domain/homology Component
: / tRNA (guanine37-N1)-methyltransferase / tRNA (guanine(37)-N1)-methyltransferase activity / tRNA methylation / cytoplasm Similarity search - Function Alpha-Beta Plaits - #2580 / tRNA methyltransferase 5, N-terminal / tRNA methyltransferase 5 N-terminal domain / SAM-dependent methyltransferase TRM5/TYW2-type domain profile. / SAM-dependent methyltransferase TRM5/TYW2-type / Met-10+ like-protein / Vaccinia Virus protein VP39 / Alpha-Beta Plaits / S-adenosyl-L-methionine-dependent methyltransferase superfamily / Rossmann fold ... Alpha-Beta Plaits - #2580 / tRNA methyltransferase 5, N-terminal / tRNA methyltransferase 5 N-terminal domain / SAM-dependent methyltransferase TRM5/TYW2-type domain profile. / SAM-dependent methyltransferase TRM5/TYW2-type / Met-10+ like-protein / Vaccinia Virus protein VP39 / Alpha-Beta Plaits / S-adenosyl-L-methionine-dependent methyltransferase superfamily / Rossmann fold / 2-Layer Sandwich / 3-Layer(aba) Sandwich / Alpha Beta Similarity search - Domain/homologyBiological species Pyrococcus abyssi (archaea)Method X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution : 3.3 Å DetailsAuthors Xie, W. / Wu, J. Funding support China, 3items Details Hide detailsOrganization Grant number Country Fundamental Research Funds for the Central Universities 16lgjc76 China Science and Technology Program of Guangzhou 201504010025 China Science and Technology Program of Guangzhou 201605030012 China
CitationJournal : Biochem. Biophys. Res. Commun. / Year : 2017Title : The crystal structure of the Pyrococcus abyssi mono-functional methyltransferase PaTrm5bAuthors : Wu, J. / Jia, Q. / Wu, S. / Zeng, H. / Sun, Y. / Wang, C. / Ge, R. / Xie, W. History Deposition Aug 31, 2017 Deposition site : PDBJ / Processing site : PDBJRevision 1.0 Sep 27, 2017 Provider : repository / Type : Initial releaseRevision 1.1 Oct 4, 2017 Group : Database references / Category : citationItem : _citation.journal_abbrev / _citation.pdbx_database_id_PubMedRevision 1.2 Oct 18, 2017 Group : Database references / Category : citationItem : _citation.journal_volume / _citation.page_first / _citation.page_lastRevision 1.3 Jul 18, 2018 Group : Data collection / Category : diffrn_source / Item : _diffrn_source.sourceRevision 1.4 Nov 22, 2023 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession
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