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- PDB-5xs1: Solution structure of Crustacean Hyperglycemic Hormone-like (CHH-... -
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Open data
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Basic information
Entry | Database: PDB / ID: 5xs1 | ||||||
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Title | Solution structure of Crustacean Hyperglycemic Hormone-like (CHH-L) from the Scylla Olivacea | ||||||
![]() | Hyperglycemic hormone-like peptide | ||||||
![]() | HORMONE / Crustacean Hyperglycemic Hormone / neuropeptide | ||||||
Function / homology | ![]() neuropeptide hormone activity / neuropeptide signaling pathway / extracellular region Similarity search - Function | ||||||
Biological species | ![]() | ||||||
Method | SOLUTION NMR / distance geometry | ||||||
![]() | Chen, Y.R. / Lyu, P.C. | ||||||
Funding support | ![]()
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![]() | ![]() Title: Solution structure of Crustacean Hyperglycemic Hormone-like (CHH-L) from the Scylla Olivacea Authors: Chen, Y.R. / Lyu, P.C. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 224.5 KB | Display | ![]() |
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PDB format | ![]() | 193.7 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 400.3 KB | Display | ![]() |
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Full document | ![]() | 494 KB | Display | |
Data in XML | ![]() | 24.6 KB | Display | |
Data in CIF | ![]() | 37 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data | |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: Protein | Mass: 8511.561 Da / Num. of mol.: 1 / Fragment: UNP residues 67-139 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
Details | Type: solution / Contents: 0.9 mM [U-13C; U-15N] CHH-L, 90% H2O/10% D2O / Label: 13C_15N_sample / Solvent system: 90% H2O/10% D2O |
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Sample | Conc.: 0.9 mM / Component: CHH-L / Isotopic labeling: [U-13C; U-15N] |
Sample conditions | Details: citrate phosphate 10 mM; sodium chloride 100 mM; potassium chloride 10 mM; L-Glu 50 mM; sodium azide 0.02% Ionic strength: 0.13 M / Label: condition_1 / pH: 3 / Pressure: 1 atm / Temperature: 298 K |
-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: distance geometry / Software ordinal: 7 | ||||||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the lowest energy Conformers calculated total number: 10 / Conformers submitted total number: 10 |