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Yorodumi- PDB-5w0m: Structure of human TUT7 catalytic module (CM) in complex with U5 RNA -
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Open data
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Basic information
| Entry | Database: PDB / ID: 5w0m | ||||||
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| Title | Structure of human TUT7 catalytic module (CM) in complex with U5 RNA | ||||||
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Keywords | TRANSFERASE/RNA / terminal uridyltransferase / TUTase / TRANSFERASE-RNA complex | ||||||
| Function / homology | Function and homology informationpolyuridylation-dependent mRNA catabolic process / uridylyltransferase activity / transposable element silencing by mRNA destabilization / RNA uridylyltransferase / RNA 3'-end processing / RNA uridylyltransferase activity / Z-decay: degradation of maternal mRNAs by zygotically expressed factors / miRNA metabolic process / Deadenylation of mRNA / pre-miRNA processing ...polyuridylation-dependent mRNA catabolic process / uridylyltransferase activity / transposable element silencing by mRNA destabilization / RNA uridylyltransferase / RNA 3'-end processing / RNA uridylyltransferase activity / Z-decay: degradation of maternal mRNAs by zygotically expressed factors / miRNA metabolic process / Deadenylation of mRNA / pre-miRNA processing / oocyte maturation / miRNA binding / Zygotic genome activation (ZGA) / RNA binding / zinc ion binding / nucleoplasm / cytosol / cytoplasm Similarity search - Function | ||||||
| Biological species | Homo sapiens (human)synthetic construct (others) | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.298 Å | ||||||
Authors | Faehnle, C.R. / Walleshauser, J. / Joshua-Tor, L. | ||||||
Citation | Journal: Nat. Struct. Mol. Biol. / Year: 2017Title: Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis. Authors: Faehnle, C.R. / Walleshauser, J. / Joshua-Tor, L. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 5w0m.cif.gz | 677.3 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb5w0m.ent.gz | 568 KB | Display | PDB format |
| PDBx/mmJSON format | 5w0m.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 5w0m_validation.pdf.gz | 483.3 KB | Display | wwPDB validaton report |
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| Full document | 5w0m_full_validation.pdf.gz | 486.9 KB | Display | |
| Data in XML | 5w0m_validation.xml.gz | 39.2 KB | Display | |
| Data in CIF | 5w0m_validation.cif.gz | 55.9 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/w0/5w0m ftp://data.pdbj.org/pub/pdb/validation_reports/w0/5w0m | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 5w0bSC ![]() 5w0nC ![]() 5w0oC S: Starting model for refinement C: citing same article ( |
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| Similar structure data |
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Assembly
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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Homo sapiens (human)
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