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Yorodumi- PDB-5try: Structure of Mycobacterium tuberculosis proteasome in complex wit... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 5try | ||||||
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| Title | Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2206 | ||||||
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Keywords | HYDROLASE/HYDROLASE inhibitor / N / C-capped dipeptides / Mycobacterium tuberculosis / proteasome / inhibitors / HYDROLASE-HYDROLASE inhibitor complex | ||||||
| Function / homology | Function and homology informationsymbiont-mediated perturbation of host defenses / zymogen binding / proteasome endopeptidase complex / proteasome core complex, beta-subunit complex / threonine-type endopeptidase activity / proteasome core complex, alpha-subunit complex / proteasomal protein catabolic process / proteolysis involved in protein catabolic process / peptidoglycan-based cell wall / modification-dependent protein catabolic process ...symbiont-mediated perturbation of host defenses / zymogen binding / proteasome endopeptidase complex / proteasome core complex, beta-subunit complex / threonine-type endopeptidase activity / proteasome core complex, alpha-subunit complex / proteasomal protein catabolic process / proteolysis involved in protein catabolic process / peptidoglycan-based cell wall / modification-dependent protein catabolic process / proteasome-mediated ubiquitin-dependent protein catabolic process / extracellular region / plasma membrane / cytoplasm Similarity search - Function | ||||||
| Biological species | ![]() | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.00000818194 Å | ||||||
Authors | Hsu, H.-C. / Fan, H. / Singh, P.K. / Wang, R. / Sukenick, G. / Nathan, C. / Lin, G. / Li, H. | ||||||
| Funding support | United States, 1items
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Citation | Journal: Biochemistry / Year: 2017Title: Structural Basis for the Species-Selective Binding of N,C-Capped Dipeptides to the Mycobacterium tuberculosis Proteasome. Authors: Hsu, H.C. / Singh, P.K. / Fan, H. / Wang, R. / Sukenick, G. / Nathan, C. / Lin, G. / Li, H. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 5try.cif.gz | 1.4 MB | Display | PDBx/mmCIF format |
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| PDB format | pdb5try.ent.gz | 949.1 KB | Display | PDB format |
| PDBx/mmJSON format | 5try.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 5try_validation.pdf.gz | 4 MB | Display | wwPDB validaton report |
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| Full document | 5try_full_validation.pdf.gz | 4.1 MB | Display | |
| Data in XML | 5try_validation.xml.gz | 204.4 KB | Display | |
| Data in CIF | 5try_validation.cif.gz | 266.7 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/tr/5try ftp://data.pdbj.org/pub/pdb/validation_reports/tr/5try | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 5thoC ![]() 5trgC ![]() 5trrC ![]() 5trsC ![]() 5ts0C ![]() 3hfaS C: citing same article ( S: Starting model for refinement |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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About Yorodumi




X-RAY DIFFRACTION
United States, 1items
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