[English] 日本語
![](img/lk-miru.gif)
- PDB-5tnc: REFINED CRYSTAL STRUCTURE OF TROPONIN C FROM TURKEY SKELETAL MUSC... -
+
Open data
-
Basic information
Entry | Database: PDB / ID: 5tnc | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
Title | REFINED CRYSTAL STRUCTURE OF TROPONIN C FROM TURKEY SKELETAL MUSCLE AT 2.0 ANGSTROMS RESOLUTION | |||||||||
![]() | TROPONIN-C | |||||||||
![]() | CONTRACTILE SYSTEM PROTEINS | |||||||||
Function / homology | ![]() | |||||||||
Biological species | ![]() ![]() | |||||||||
Method | ![]() | |||||||||
![]() | Herzberg, O. / James, M.N.G. | |||||||||
![]() | ![]() Title: Refined crystal structure of troponin C from turkey skeletal muscle at 2.0 A resolution. Authors: Herzberg, O. / James, M.N. #1: ![]() Title: Molecular Structure of Troponin C and its Implications for the Ca2+ Triggering of Muscle Contraction Authors: Herzberg, O. / Moult, J. / James, M.N.G. #2: ![]() Title: Conformational Flexibility of Troponin C Authors: Herzberg, O. / Moult, J. / James, M.N.G. #3: ![]() Title: Calcium Binding to Skeletal Muscle Troponin C and the Regulation of Muscle Contraction Authors: Herzberg, O. / Moult, J. / James, M.N.G. #4: ![]() Title: Crystallographic Determination of Lanthanide Ion Binding to Troponin C Authors: Herzberg, O. / James, M.N.G. #5: ![]() Title: A Model for the Ca2+-Induced Conformational Transition of Troponin C. A Trigger for Muscle Contraction Authors: Herzberg, O. / Moult, J. / James, M.N.G. #6: ![]() Title: Common Structural Framework of the Two Ca2+(Slash)Mg2+ Binding Loops of Troponin C and Other Ca2+ Binding Proteins Authors: Herzberg, O. / James, M.N.G. #7: ![]() Title: Structure of the Calcium Regulatory Muscle Protein Troponin-C at 2.8 Angstroms Resolution Authors: Herzberg, O. / James, M.N.G. #8: ![]() Title: Crystallographic Data for Troponin C from Turkey Skeletal Muscle Authors: Herzberg, O. / Hayakawa, K. / James, M.N.G. #9: ![]() Title: The Crystal Structure of Troponin C from Turkey Skeletal Muscle at 2.8 Angstroms Resolution Authors: Herzberg, O. / James, M.N.G. | |||||||||
History |
|
-
Structure visualization
Structure viewer | Molecule: ![]() ![]() |
---|
-
Downloads & links
-
Download
PDBx/mmCIF format | ![]() | 53.8 KB | Display | ![]() |
---|---|---|---|---|
PDB format | ![]() | 34.2 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 370 KB | Display | ![]() |
---|---|---|---|---|
Full document | ![]() | 413.6 KB | Display | |
Data in XML | ![]() | 13.2 KB | Display | |
Data in CIF | ![]() | 17.7 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
---|
-
Links
-
Assembly
Deposited unit | ![]()
| ||||||||
---|---|---|---|---|---|---|---|---|---|
1 |
| ||||||||
Unit cell |
| ||||||||
Atom site foot note | 1: SEE REMARK 4. / 2: SEE REMARK 6. |
-
Components
#1: Protein | Mass: 18320.209 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() | ||||||
---|---|---|---|---|---|---|---|
#2: Chemical | #3: Water | ChemComp-HOH / | Nonpolymer details | THE WATER MOLECULES ARE ARRANGED IN DESCENDING ORDER OF RELIABILITY WHERE RELIABILITY IS DEFINED BY ...THE WATER MOLECULES ARE ARRANGED IN DESCENDING | Sequence details | BASED ON AMINO ACID COMPOSITION AND THE ELECTRON DENSITY MAP, ALA 99 IN CHICKEN TNC WAS IDENTIFIED ...BASED ON AMINO ACID COMPOSITIO | |
-Experimental details
-Experiment
Experiment | Method: ![]() |
---|
-
Sample preparation
Crystal | Density Matthews: 2.13 Å3/Da / Density % sol: 42.12 % | ||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Crystal grow | *PLUS Method: unknown / PH range low: 5 / PH range high: 4.9 | ||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
|
-Data collection
Reflection | *PLUS Highest resolution: 2 Å / Num. obs: 8054 / Observed criterion σ(I): 2 / Rmerge(I) obs: 0.06 / Num. measured all: 10825 |
---|
-
Processing
Software | Name: PROLSQ / Classification: refinement | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Refinement | Rfactor obs: 0.155 / Highest resolution: 2 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Highest resolution: 2 Å
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine LS restraints |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement | *PLUS Num. reflection obs: 8054 / σ(I): 2 / Highest resolution: 2 Å / Lowest resolution: 10 Å / Rfactor obs: 0.155 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Displacement parameters | *PLUS |