- PDB-5mdp: Crystal structure of in vitro folded Chitoporin VhChip from Vibri... -
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Basic information
Entry
Database: PDB / ID: 5mdp
Title
Crystal structure of in vitro folded Chitoporin VhChip from Vibrio harveyi (crystal form II)
Components
Chitoporin
Keywords
SUGAR BINDING PROTEIN / outer membrane protein / Vibrio harveyi / porin channel
Function / homology
Gram-negative porin / Porin domain, Gram-negative type / Porin, Gram-negative type / Porin domain superfamily / porin activity / monoatomic ion transmembrane transport / cell outer membrane / metal ion binding / Chitoporin
Resolution: 3.08→127.2 Å / Cor.coef. Fo:Fc: 0.929 / Cor.coef. Fo:Fc free: 0.913 / SU B: 50.469 / SU ML: 0.356 / Cross valid method: THROUGHOUT / ESU R: 1.766 / ESU R Free: 0.374 / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.23977
1731
5 %
RANDOM
Rwork
0.21699
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obs
0.2181
33200
95.48 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å