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- PDB-5lqh: A two-quartet G-quadruplex formed by human telomere in KCl soluti... -
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Open data
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Basic information
Entry | Database: PDB / ID: 5lqh | ||||||||||||||||||||
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Title | A two-quartet G-quadruplex formed by human telomere in KCl solution at pH 5.0 | ||||||||||||||||||||
![]() | DNA (5'-D(*![]() DNA / human telomere repeat / G-quadruplex / topology | Function / homology | DNA / DNA (> 10) | ![]() Biological species | ![]() Method | SOLUTION NMR / simulated annealing | ![]() Galer, P. / Wang, B. / Sket, P. / Plavec, J. | ![]() ![]() Title: Reversible pH Switch of Two-Quartet G-Quadruplexes Formed by Human Telomere. Authors: Galer, P. / Wang, B. / Sket, P. / Plavec, J. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 144.1 KB | Display | ![]() |
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PDB format | ![]() | 114.5 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 5lqgC C: citing same article ( |
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Similar structure data | |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: DNA chain | Mass: 6958.484 Da / Num. of mol.: 1 / Source method: obtained synthetically / Source: (synth.) ![]() |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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NMR experiment |
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Sample preparation
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Sample |
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Sample conditions | Ionic strength: 70 mM / Label: conditions_1 / pH: 5 / Pressure: 1 atm / Temperature: 278 K |
-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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Refinement | Method: simulated annealing / Software ordinal: 6 | ||||||||||||||||||||||||||||
NMR representative | Selection criteria: lowest energy | ||||||||||||||||||||||||||||
NMR ensemble | Conformer selection criteria: structures with the least restraint violations Conformers calculated total number: 100 / Conformers submitted total number: 10 |