Entry | Database: PDB / ID: 5jqr |
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Title | The Structure of Ascorbate Peroxidase Compound II formed by reaction with m-CPBA |
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Components | Ascorbate peroxidase |
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Keywords | OXIDOREDUCTASE / Heme Peroxidase / Intermediates / Compound II / Ferryl / Multicrystal |
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Function / homology | Function and homology information
L-ascorbate peroxidase / L-ascorbate peroxidase activity / chloroplast / response to reactive oxygen species / hydrogen peroxide catabolic process / cellular response to oxidative stress / heme binding / metal ion bindingSimilarity search - Function Class I peroxidase / Heme-binding peroxidase Ccp1-like / Peroxidase; domain 2 / Peroxidase, domain 2 / Peroxidase; domain 1 - #10 / Peroxidase; domain 1 / Peroxidases heam-ligand binding site / Peroxidase, active site / Peroxidases active site signature. / Plant heme peroxidase family profile. ...Class I peroxidase / Heme-binding peroxidase Ccp1-like / Peroxidase; domain 2 / Peroxidase, domain 2 / Peroxidase; domain 1 - #10 / Peroxidase; domain 1 / Peroxidases heam-ligand binding site / Peroxidase, active site / Peroxidases active site signature. / Plant heme peroxidase family profile. / Haem peroxidase / Peroxidase / Peroxidases proximal heme-ligand signature. / Haem peroxidase superfamily / Orthogonal Bundle / Mainly AlphaSimilarity search - Domain/homology |
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Biological species | ![](img/tx_plant.gif) Glycine max (soybean) |
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Method | X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 1.81 Å |
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Authors | Kwon, H. / Raven, E.L. / Moody, P.C.E. |
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Funding support | United Kingdom, 2items Organization | Grant number | Country |
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Biotechnology and Biological Sciences Research Council | BB/K015656/1 | United Kingdom | Wellcome Trust | WT094104MA | United Kingdom |
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Citation | Journal: Nat Commun / Year: 2016 Title: Direct visualization of a Fe(IV)-OH intermediate in a heme enzyme. Authors: Kwon, H. / Basran, J. / Casadei, C.M. / Fielding, A.J. / Schrader, T.E. / Ostermann, A. / Devos, J.M. / Aller, P. / Blakeley, M.P. / Moody, P.C. / Raven, E.L. |
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History | Deposition | May 5, 2016 | Deposition site: RCSB / Processing site: PDBE |
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Revision 1.0 | Dec 21, 2016 | Provider: repository / Type: Initial release |
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Revision 2.0 | Aug 30, 2017 | Group: Atomic model / Author supporting evidence / Category: atom_site / pdbx_audit_support Item: _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ..._atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _pdbx_audit_support.funding_organization |
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Revision 2.1 | Jan 10, 2024 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_special_symmetry Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession |
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