Entry Database : PDB / ID : 5jmv Structure visualization Downloads & linksTitle Crystal structure of mjKae1-pfuPcc1 complex ComponentsProbable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein Uncharacterized protein DetailsKeywords TRANSFERASE / tRNA modificationFunction / homology Function and homology informationFunction Domain/homology Component
N6-L-threonylcarbamoyladenine synthase / N(6)-L-threonylcarbamoyladenine synthase activity / EKC/KEOPS complex / tRNA threonylcarbamoyladenosine modification / protein serine/threonine/tyrosine kinase activity / metalloendopeptidase activity / non-specific serine/threonine protein kinase / iron ion binding / phosphorylation / protein serine kinase activity ... N6-L-threonylcarbamoyladenine synthase / N(6)-L-threonylcarbamoyladenine synthase activity / EKC/KEOPS complex / tRNA threonylcarbamoyladenosine modification / protein serine/threonine/tyrosine kinase activity / metalloendopeptidase activity / non-specific serine/threonine protein kinase / iron ion binding / phosphorylation / protein serine kinase activity / protein serine/threonine kinase activity / zinc ion binding / ATP binding / cytoplasm Similarity search - Function Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein / tRNA N6-adenosine threonylcarbamoyltransferase Kae1, archaea and eukaryote / Serine/threonine-protein kinase Bud32 / Peptidase M22, conserved site / Glycoprotease family signature. / CTAG/Pcc1 family / Transcription factor Pcc1 / Kae1/TsaD family / Gcp-like domain / tRNA N6-adenosine threonylcarbamoyltransferase ... Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein / tRNA N6-adenosine threonylcarbamoyltransferase Kae1, archaea and eukaryote / Serine/threonine-protein kinase Bud32 / Peptidase M22, conserved site / Glycoprotease family signature. / CTAG/Pcc1 family / Transcription factor Pcc1 / Kae1/TsaD family / Gcp-like domain / tRNA N6-adenosine threonylcarbamoyltransferase / RIO1 family / Alpha-D-phosphohexomutase, C-terminal domain / TATA-Binding Protein / ATPase, nucleotide binding domain / ATPase, nucleotide binding domain / Nucleotidyltransferase; domain 5 / Tyrosine protein kinases specific active-site signature. / Tyrosine-protein kinase, active site / Protein kinase domain profile. / Protein kinase domain / Protein kinase-like domain superfamily / 2-Layer Sandwich / Alpha Beta Similarity search - Domain/homology ADENOSINE MONOPHOSPHATE / Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein / KEOPS complex subunit Pcc1 Similarity search - ComponentBiological species Methanocaldococcus jannaschii (archaea)Pyrococcus furiosus (archaea)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution : 3.38646964319 Å DetailsAuthors Wan, L. / Sicheri, F. Funding support Canada, 1items Details Hide detailsOrganization Grant number Country CIHR Foundation Grant FDN 143277 Canada
CitationJournal : Nucleic Acids Res. / Year : 2016Title : Structural and functional characterization of KEOPS dimerization by Pcc1 and its role in t6A biosynthesis.Authors : Wan, L.C. / Pillon, M.C. / Thevakumaran, N. / Sun, Y. / Chakrabartty, A. / Guarne, A. / Kurinov, I. / Durocher, D. / Sicheri, F. History Deposition Apr 29, 2016 Deposition site : RCSB / Processing site : RCSBRevision 1.0 Jul 6, 2016 Provider : repository / Type : Initial releaseRevision 1.1 Jul 13, 2016 Group : Structure summaryRevision 1.2 Aug 31, 2016 Group : Database referencesRevision 1.3 Nov 22, 2017 Group : Database references / Derived calculations / Refinement descriptionCategory : citation / pdbx_struct_oper_list / softwareItem : _citation.journal_id_CSD / _pdbx_struct_oper_list.symmetry_operation / _software.nameRevision 1.4 Sep 27, 2023 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession ... _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id
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