登録情報 | データベース: PDB / ID: 5jiu |
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タイトル | The crystal structure of RanBPM/9 IUS-SPRY domain in complex with DDX-4 peptide |
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要素 | - Probable ATP-dependent RNA helicase DDX4
- Ran-binding protein 9
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キーワード | RAN BINDING PROTEIN/PEPTIDE / beta sandwich / Ran binding protein / TRANSPORT PROTEIN / RAN BINDING PROTEIN-PEPTIDE complex |
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機能・相同性 | 機能・相同性情報
piRNA processing => GO:0034587 / : / : / piP-body / pi-body / L1CAM interactions / positive regulation of amyloid precursor protein catabolic process / piRNA processing / flagellated sperm motility / multicellular organism development ...piRNA processing => GO:0034587 / : / : / piP-body / pi-body / L1CAM interactions / positive regulation of amyloid precursor protein catabolic process / piRNA processing / flagellated sperm motility / multicellular organism development / male meiotic nuclear division / chromatoid body / gamete generation / microtubule nucleation / regulatory ncRNA-mediated gene silencing / P granule / microtubule associated complex / male meiosis I / MET activates RAS signaling / ubiquitin ligase complex / cytoskeleton organization / negative regulation of ERK1 and ERK2 cascade / small GTPase binding / regulation of protein localization / RAF/MAP kinase cascade / spermatogenesis / protein-containing complex assembly / RNA helicase activity / cell differentiation / nuclear body / RNA helicase / ribonucleoprotein complex / perinuclear region of cytoplasm / enzyme binding / ATP hydrolysis activity / RNA binding / nucleoplasm / ATP binding / nucleus / plasma membrane / cytoplasm / cytosol類似検索 - 分子機能 Ran binding protein 9/10, SPRY domain / CRA domain / CT11-RanBPM / CTLH/CRA C-terminal to LisH motif domain / CTLH/CRA C-terminal to LisH motif domain / LisH / SPRY domain / C-terminal to LisH motif. / CTLH, C-terminal LisH motif / C-terminal to LisH (CTLH) motif profile. ...Ran binding protein 9/10, SPRY domain / CRA domain / CT11-RanBPM / CTLH/CRA C-terminal to LisH motif domain / CTLH/CRA C-terminal to LisH motif domain / LisH / SPRY domain / C-terminal to LisH motif. / CTLH, C-terminal LisH motif / C-terminal to LisH (CTLH) motif profile. / Lissencephaly type-1-like homology motif / LIS1 homology (LisH) motif profile. / LIS1 homology motif / DEAD-box subfamily ATP-dependent helicases signature. / ATP-dependent RNA helicase DEAD-box, conserved site / RNA helicase, DEAD-box type, Q motif / DEAD-box RNA helicase Q motif profile. / SPRY domain / B30.2/SPRY domain / B30.2/SPRY domain profile. / SPRY domain / B30.2/SPRY domain superfamily / Domain in SPla and the RYanodine Receptor. / DEAD/DEAH box helicase / DEAD/DEAH box helicase domain / Helicase conserved C-terminal domain / helicase superfamily c-terminal domain / Superfamilies 1 and 2 helicase C-terminal domain profile. / Concanavalin A-like lectin/glucanase domain superfamily / Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. / DEAD-like helicases superfamily / Helicase, C-terminal / Helicase superfamily 1/2, ATP-binding domain / Jelly Rolls / Sandwich / P-loop containing nucleoside triphosphate hydrolase / Mainly Beta類似検索 - ドメイン・相同性 ATP-dependent RNA helicase DDX4 / Ran-binding protein 9類似検索 - 構成要素 |
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生物種 | Homo sapiens (ヒト) Mus musculus (ハツカネズミ) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 2.054 Å |
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データ登録者 | Hong, S.K. / Kim, K.-H. / Kim, E.E. |
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資金援助 | 韓国, 2件 組織 | 認可番号 | 国 |
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Ministry of Science | NRF 20110021713 | 韓国 | Korea Institute of Science and Technology | | 韓国 |
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引用 | ジャーナル: J.Mol.Biol. / 年: 2016 タイトル: Structural Basis for the Interaction between the IUS-SPRY Domain of RanBPM and DDX-4 in Germ Cell Development. 著者: Hong, S.K. / Kim, K.H. / Song, E.J. / Kim, E.E. |
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履歴 | 登録 | 2016年4月22日 | 登録サイト: RCSB / 処理サイト: PDBJ |
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改定 1.0 | 2016年11月9日 | Provider: repository / タイプ: Initial release |
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改定 1.1 | 2023年11月8日 | Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description カテゴリ: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / citation / database_2 / pdbx_initial_refinement_model / pdbx_struct_oper_list Item: _citation.journal_id_CSD / _database_2.pdbx_DOI ..._citation.journal_id_CSD / _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_oper_list.symmetry_operation |
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