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- PDB-5flj: enzyme-substrate-dioxygen complex of Ni-quercetinase -

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ID or keywords:

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Basic information

Entry
Database: PDB / ID: 5flj
Titleenzyme-substrate-dioxygen complex of Ni-quercetinase
ComponentsQUERCETINASE QUED
KeywordsOXIDOREDUCTASE / DIOXYGENASE / NICKEL / STREPTOMYCES / NI-QUERCETINASE / DIOXYGEN
Function / homology
Function and homology information


Cupin 2, conserved barrel / Cupin domain / RmlC-like cupin domain superfamily / Jelly Rolls / RmlC-like jelly roll fold / Jelly Rolls / Sandwich / Mainly Beta
Similarity search - Domain/homology
NICKEL (II) ION / OXYGEN MOLECULE / 3,5,7,3',4'-PENTAHYDROXYFLAVONE / Quercetinase QueD
Similarity search - Component
Biological speciesSTREPTOMYCES SP. (bacteria)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 1.818 Å
AuthorsJeoung, J.-H. / Nianios, D. / Fetzner, S. / Dobbek, H.
CitationJournal: Angew.Chem.Int.Ed.Engl. / Year: 2016
Title: Quercetin 2,4-Dioxygenase Activates Dioxygen in a Side-on O2 -Ni Complex.
Authors: Jeoung, J. / Nianios, D. / Fetzner, S. / Dobbek, H.
History
DepositionOct 26, 2015Deposition site: PDBE / Processing site: PDBE
Revision 1.0Jun 1, 2016Provider: repository / Type: Initial release
Revision 1.1Jan 10, 2024Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Other / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_database_status / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_database_status.status_code_sf / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_alt_id / _pdbx_struct_conn_angle.ptnr1_label_asym_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_alt_id / _pdbx_struct_conn_angle.ptnr3_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_ptnr1_label_alt_id / _struct_conn.pdbx_ptnr2_label_alt_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: QUERCETINASE QUED
B: QUERCETINASE QUED
C: QUERCETINASE QUED
D: QUERCETINASE QUED
E: QUERCETINASE QUED
F: QUERCETINASE QUED
G: QUERCETINASE QUED
H: QUERCETINASE QUED
I: QUERCETINASE QUED
J: QUERCETINASE QUED
K: QUERCETINASE QUED
L: QUERCETINASE QUED
hetero molecules


Theoretical massNumber of molelcules
Total (without water)258,69053
Polymers253,12312
Non-polymers5,56741
Water22,9871276
1
C: QUERCETINASE QUED
D: QUERCETINASE QUED
hetero molecules


Theoretical massNumber of molelcules
Total (without water)43,17510
Polymers42,1872
Non-polymers9888
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5520 Å2
ΔGint-72 kcal/mol
Surface area15870 Å2
MethodPISA
2
K: QUERCETINASE QUED
L: QUERCETINASE QUED
hetero molecules


Theoretical massNumber of molelcules
Total (without water)43,0658
Polymers42,1872
Non-polymers8786
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5830 Å2
ΔGint-69.7 kcal/mol
Surface area15820 Å2
MethodPISA
3
G: QUERCETINASE QUED
H: QUERCETINASE QUED
hetero molecules


Theoretical massNumber of molelcules
Total (without water)43,1439
Polymers42,1872
Non-polymers9567
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5860 Å2
ΔGint-68.7 kcal/mol
Surface area16020 Å2
MethodPISA
4
E: QUERCETINASE QUED
F: QUERCETINASE QUED
hetero molecules


Theoretical massNumber of molelcules
Total (without water)43,17510
Polymers42,1872
Non-polymers9888
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area6220 Å2
ΔGint-63.7 kcal/mol
Surface area15770 Å2
MethodPISA
5
I: QUERCETINASE QUED
J: QUERCETINASE QUED
hetero molecules


Theoretical massNumber of molelcules
Total (without water)43,0658
Polymers42,1872
Non-polymers8786
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5840 Å2
ΔGint-69.1 kcal/mol
Surface area15490 Å2
MethodPISA
6
A: QUERCETINASE QUED
B: QUERCETINASE QUED
hetero molecules


Theoretical massNumber of molelcules
Total (without water)43,0658
Polymers42,1872
Non-polymers8786
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5980 Å2
ΔGint-66.2 kcal/mol
Surface area15820 Å2
MethodPISA
Unit cell
Length a, b, c (Å)102.812, 114.586, 105.990
Angle α, β, γ (deg.)90.00, 95.61, 90.00
Int Tables number4
Space group name H-MP1211

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Components

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Protein , 1 types, 12 molecules ABCDEFGHIJKL

#1: Protein
QUERCETINASE QUED / NI-QUERECETINASE


Mass: 21093.562 Da / Num. of mol.: 12
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) STREPTOMYCES SP. (bacteria) / Strain: FLA / Production host: ESCHERICHIA COLI (E. coli) / Strain (production host): BL21(DE3) / References: UniProt: A2VA43, quercetin 2,3-dioxygenase

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Non-polymers , 5 types, 1317 molecules

#2: Chemical
ChemComp-NI / NICKEL (II) ION


Mass: 58.693 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: Ni
#3: Chemical
ChemComp-QUE / 3,5,7,3',4'-PENTAHYDROXYFLAVONE / QUERCETIN


Mass: 302.236 Da / Num. of mol.: 12 / Source method: obtained synthetically / Formula: C15H10O7
#4: Chemical
ChemComp-DMS / DIMETHYL SULFOXIDE


Mass: 78.133 Da / Num. of mol.: 15 / Source method: obtained synthetically / Formula: C2H6OS / Comment: DMSO, precipitant*YM
#5: Chemical ChemComp-OXY / OXYGEN MOLECULE


Mass: 31.999 Da / Num. of mol.: 2 / Source method: obtained synthetically / Formula: O2
#6: Water ChemComp-HOH / water


Mass: 18.015 Da / Num. of mol.: 1276 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.4 Å3/Da / Density % sol: 48.7 % / Description: NONE
Crystal growpH: 8
Details: 0.1 M CACL2, 0.1 M TRIS-HCL PH 8.0, 10 - 13% PEG6000 AND 5% GLYCEROL

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: BESSY / Beamline: 14.1 / Wavelength: 0.9184
DetectorType: MARMOSAIC 225 mm CCD / Detector: CCD
RadiationMonochromator: SI-111 / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9184 Å / Relative weight: 1
ReflectionResolution: 1.82→47.91 Å / Num. obs: 210593 / % possible obs: 96.4 % / Observed criterion σ(I): 1.6 / Redundancy: 3.7 % / Biso Wilson estimate: 30.6 Å2 / Rmerge(I) obs: 0.05 / Net I/σ(I): 14.3
Reflection shellResolution: 1.82→1.96 Å / Rmerge(I) obs: 0.79 / % possible all: 91.1

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Processing

Software
NameVersionClassification
PHENIX(PHENIX.REFINE)refinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: PDB ENTRY 5FLH
Resolution: 1.818→38.803 Å / SU ML: 0.21 / σ(F): 1.35 / Phase error: 22.71 / Stereochemistry target values: ML
RfactorNum. reflection% reflection
Rfree0.2076 10533 5 %
Rwork0.1641 --
obs0.1662 210593 96.08 %
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Refinement stepCycle: LAST / Resolution: 1.818→38.803 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms17667 0 340 1276 19283
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.0118901
X-RAY DIFFRACTIONf_angle_d1.18125645
X-RAY DIFFRACTIONf_dihedral_angle_d16.5766846
X-RAY DIFFRACTIONf_chiral_restr0.0522506
X-RAY DIFFRACTIONf_plane_restr0.0063439
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
1.8177-1.83840.32812890.2885496X-RAY DIFFRACTION79
1.8384-1.860.31133270.27236201X-RAY DIFFRACTION90
1.86-1.88270.32033310.27526302X-RAY DIFFRACTION91
1.8827-1.90650.30513340.24026328X-RAY DIFFRACTION91
1.9065-1.93160.23393360.21726387X-RAY DIFFRACTION92
1.9316-1.95810.26143360.21336382X-RAY DIFFRACTION93
1.9581-1.9860.25663410.21676488X-RAY DIFFRACTION94
1.986-2.01570.27043450.21116553X-RAY DIFFRACTION95
2.0157-2.04720.25823510.20886665X-RAY DIFFRACTION96
2.0472-2.08070.25253510.1986667X-RAY DIFFRACTION96
2.0807-2.11660.22693520.18246685X-RAY DIFFRACTION97
2.1166-2.15510.24083550.18386759X-RAY DIFFRACTION98
2.1551-2.19650.23953580.18016784X-RAY DIFFRACTION98
2.1965-2.24140.21753550.18216754X-RAY DIFFRACTION98
2.2414-2.29010.2393600.186850X-RAY DIFFRACTION98
2.2901-2.34340.23423550.18536742X-RAY DIFFRACTION98
2.3434-2.4020.21463610.186852X-RAY DIFFRACTION99
2.402-2.46690.24093580.18056793X-RAY DIFFRACTION98
2.4669-2.53950.26233570.19116790X-RAY DIFFRACTION98
2.5395-2.62140.22433600.17636839X-RAY DIFFRACTION98
2.6214-2.71510.21653600.17966849X-RAY DIFFRACTION98
2.7151-2.82380.21043580.16866788X-RAY DIFFRACTION98
2.8238-2.95220.21843610.16386875X-RAY DIFFRACTION99
2.9522-3.10780.21493590.16526821X-RAY DIFFRACTION98
3.1078-3.30240.23143610.15536847X-RAY DIFFRACTION99
3.3024-3.55730.18563630.15236890X-RAY DIFFRACTION99
3.5573-3.91490.18763610.14446866X-RAY DIFFRACTION99
3.9149-4.48070.17493630.12896900X-RAY DIFFRACTION99
4.4807-5.64250.15823650.12666938X-RAY DIFFRACTION99
5.6425-38.81190.17533700.16047020X-RAY DIFFRACTION99
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
16.64813.3586-0.15837.48172.48915.7077-0.07321.0478-0.4102-0.9142-0.10130.14510.2681-0.49930.08490.40930.0527-0.02180.6828-0.04920.206167.17164.2499-11.7529
23.56120.04240.23162.075-0.09011.98820.06780.49720.1224-0.33480.02550.0708-0.1327-0.2828-0.06130.26860.0478-0.01820.34670.0710.1699163.35147.7812-2.3001
38.4685-3.16424.10435.4765-2.39164.5334-0.39170.44371.34220.192-0.0086-0.4716-1.39340.04350.45320.62090.06840.13340.37090.17890.5613166.081325.42936.0249
43.1825-0.90252.02555.2678-1.15912.6906-0.06790.01930.70840.42940.0860.1186-0.7311-0.33150.04590.37470.08210.07530.24040.04870.3378160.818422.655514.0639
51.008-0.3006-0.49891.32280.22341.46120.20840.40650.4787-0.2521-0.04520.0126-0.5447-0.1116-0.08520.36090.06510.0240.28340.12470.3345163.609818.77325.0828
61.3216-1.07971.15233.3738-0.03882.4824-0.05650.86270.8368-0.62030.0687-0.1932-0.88870.10250.04740.5471-0.01290.12450.50450.2690.6482174.67421.6115-4.5619
72.7363-0.24580.89867.16112.55446.66180.41720.29820.9369-0.06180.1615-0.6613-1.714-0.3004-0.21710.80260.0630.07330.38720.23490.7754163.959531.97083.9968
81.83120.5288-0.43311.9214-0.99382.56950.22390.18090.39390.01650.02190.497-0.3525-0.3912-0.15450.23440.13050.02010.29540.04920.3741147.536713.942715.3536
96.9862-2.2155.46182.4334-1.99244.37780.4163-0.1414-0.5511-0.64190.00530.48820.9059-1.0153-0.42690.3579-0.045-0.10560.54930.04420.3846146.8886-4.90226.5002
103.8921-0.10561.83552.9892-0.72794.01620.11490.625-0.3827-0.45790.05150.32050.3988-0.2268-0.1620.27720.0098-0.06990.3215-0.04080.2249156.0936-4.80782.5796
111.2678-0.3570.36672.1052-1.56013.34480.03240.1951-0.1597-0.30950.14930.3390.3159-0.543-0.15580.21950.006-0.06780.27710.00260.2363154.7119-3.70176.7565
120.13340.3387-0.16561.2154-0.17680.80290.09740.4860.1864-0.146-0.00210.5421-0.1343-0.5654-0.11480.26190.1095-0.07450.48780.06160.3711145.17845.92159.8856
136.22450.21270.18556.69660.95187.95160.0746-0.5584-0.55160.23420.19740.7650.1532-0.6684-0.2140.294-0.01870.03590.43720.11240.4081143.2636-0.986423.4059
141.7265-2.57022.09084.1166-2.48813.8740.37341.072-0.46250.37990.11871.61570.3328-2.0218-0.46610.4458-0.1181-0.11560.90790.1270.8875131.7931-2.05069.0505
153.4735-0.724-0.78562.38571.22754.83440.1761.3553-1.1337-0.0345-0.6380.78430.4468-0.96070.3460.4532-0.1817-0.18150.5867-0.04640.6982142.8439-7.97621.6763
163.3835-4.5209-2.14047.4836-0.41699.63450.15530.44880.89-0.8856-0.47571.3189-0.8316-0.00180.30090.51150.1581-0.17740.66940.05510.7523105.296969.89680.4075
171.94250.6608-0.76052.78460.6713.04410.01090.26230.1559-0.1830.01370.3741-0.2422-0.484-0.03420.16390.0402-0.05050.3476-0.01820.2477113.11362.245880.927
183.10531.94990.99423.94122.30445.71040.2627-0.4701-0.27150.3567-0.22820.36250.7231-0.8320.10030.2488-0.10590.04870.436-0.03710.3706113.466645.424789.4008
193.71122.04141.05452.33850.67392.89160.04490.0416-0.49640.1523-0.0977-0.02190.4291-0.41970.04890.2551-0.0959-0.00710.2796-0.05390.2668121.870743.926487.7892
202.72930.68862.79752.1230.32487.3519-0.12070.0249-0.2149-0.08610.00440.3157-0.1883-0.61460.11010.1696-0.01050.0260.2842-0.05150.2219118.124453.161187.4507
213.27921.84141.495.0561.65855.64410.1784-0.21520.26860.5258-0.15420.72510.0804-0.7597-0.03910.2180.00580.06420.4424-0.08830.3786106.879159.204393.2506
228.0034-0.5806-3.34982.5338-0.55042.15270.45860.3626-0.63660.3146-0.29411.91670.451-2.0322-0.06070.4999-0.17560.08410.8977-0.01310.85397.846947.739289.4942
235.3177-2.94220.43189.7027-2.10445.0505-0.1987-0.4142-0.90470.642-0.22550.20110.4879-0.62960.36650.5043-0.29360.01920.57940.03370.4949110.898738.362891.4337
242.3336-0.9314-0.12418.9362-5.98184.3150.2624-0.3193-0.56730.5167-0.00530.27280.577-0.234-0.2520.4925-0.02390.02080.3274-0.03960.3984133.737538.361371.9949
254.84340.3768-0.75684.23750.09923.4888-0.06150.3213-0.7767-0.1982-0.002-0.03990.7023-0.1766-0.04310.2828-0.05970.01010.1947-0.04460.226128.520441.069878.8915
263.413-0.1161-1.02171.9363-0.06041.4521-0.06530.282-0.0001-0.183-0.00460.09330.0673-0.28290.06340.2295-0.0484-0.02480.2744-0.04090.1682128.665651.245971.7808
273.69172.09714.89683.78850.64178.0617-0.37910.99590.6239-0.8310.17360.3177-0.61420.3430.07080.39970.0330.00660.4464-0.01760.2475128.925264.467764.8748
283.53711.17620.39884.01130.40323.51010.09140.48780.2517-0.34580.04890.1427-0.2247-0.2515-0.12890.23150.0324-0.00060.23680.01780.1882125.806365.625774.0348
299.5315-0.83216.80813.2239-1.70065.2289-0.390.23080.9486-0.47990.06150.4201-1.5582-0.79810.41710.57130.1698-0.06180.45410.05080.365120.758173.972269.3637
303.56760.82581.38711.59320.13872.23060.01670.62070.0964-0.37090.01580.042-0.1844-0.0302-0.02580.30130.0041-0.03730.26760.03240.2011127.328966.368372.418
310.8625-0.5763-0.63382.17360.42350.49370.1570.3497-0.0906-0.3584-0.18470.01710.091-0.34740.01070.2725-0.0206-0.04470.3569-0.02530.1843128.1753.405167.5857
326.1088-0.31130.38446.2842-6.66349.3627-0.14640.7658-0.1134-0.7887-0.0087-0.27860.69920.76920.15330.3715-0.06460.08830.4506-0.06310.3487143.115854.585367.217
333.11931.6129-0.02643.49160.4972.7156-0.37231.5944-0.445-1.81840.1212-0.1546-0.49250.78740.25350.6568-0.04960.04530.70350.00020.3256131.583354.933252.9546
344.6861-1.65850.6265.12750.08695.7756-0.10990.75330.5823-1.72960.0616-0.2496-1.2094-0.18850.0240.657-0.0122-0.0740.51060.07040.3082126.599367.938559.0893
359.23782.3004-3.07089.82487.54269.71550.07150.2062-0.7986-0.4554-0.1010.29940.3615-0.5402-0.02330.4807-0.0292-0.03040.39630.1110.557299.479636.111332.5919
367.6599-0.8886-1.28675.6645-1.01197.49840.00670.0116-1.0127-0.5141-0.03570.53250.8248-0.1581-0.00450.2373-0.0311-0.03640.2440.00370.2806105.414739.185426.6154
377.2474-4.8456-4.80485.87181.99814.2051-0.2043-0.2030.08040.37590.1304-0.071-0.01590.06350.08720.24160.0194-0.01910.33430.04560.2294100.735650.382336.1317
383.9161-3.66170.00547.9501-0.36122.0767-0.1039-0.1909-0.08370.27520.0482-0.04480.2215-0.01030.03090.27970.02810.0050.28940.04960.2258111.32845.847334.5544
398.4747-3.09664.95852.7852-2.63185.8132-0.1208-0.86340.23480.61180.2852-0.0875-0.3159-0.3818-0.17490.35520.03430.00660.52890.0560.2304109.079359.021644.7633
402.2696-0.94681.71471.5766-1.0423.071-0.1378-0.4045-0.04350.33720.0462-0.0698-0.09890.15820.07520.24410.0509-0.03340.33370.0160.1692112.019961.654635.8328
418.8953-1.29746.20735.5845-1.51884.5314-0.4247-0.12880.62880.65510.021-0.6859-0.99671.22890.42720.3987-0.0615-0.04370.523-0.03440.2748118.37367.820142.0297
421.7452-0.77161.56411.5375-1.68554.26-0.1254-0.32550.06160.25360.0205-0.1026-0.1193-0.16810.10150.28120.0045-0.06940.39030.02690.2192114.32960.988139.4834
431.05161.1133-0.8092.66920.41782.05940.0316-0.2553-0.18750.2641-0.01670.03530.1938-0.0454-0.00230.21810.0208-0.02070.33410.0440.1832106.029852.246538.3764
447.4642-0.42430.39464.06793.90067.0967-0.2567-0.5891-0.04770.47780.10170.44080.4198-0.91570.13740.29740.0380.08020.48630.04240.371492.515852.380640.0712
455.8884-0.7001-4.25166.3471-0.2963.1734-0.7054-1.8723-0.51972.33070.1975-0.16360.6624-0.72060.52140.75380.06670.00710.94230.0760.3731103.440948.341754.6512
464.37893.02720.40185.42020.39715.51030.238-0.61920.13811.5502-0.41550.0277-0.71530.28310.09840.60650.0779-0.08570.66680.02960.3104111.26661.407850.9709
476.60970.6904-2.36413.55724.76158.18510.2265-0.00780.19910.35980.3113-1.251-0.24260.3801-0.41140.365-0.0969-0.1660.59980.0110.501133.149263.263930.4135
484.3545-0.0686-0.55024.31310.7045.1565-0.1439-0.24660.25870.498-0.0699-0.649-0.57440.6350.17230.2313-0.0177-0.08540.34060.02950.2582124.741863.16833.7816
491.64790.6609-2.0442.2342-0.92835.5905-0.0459-0.1028-0.176-0.03110.0466-0.25380.20070.1725-0.01170.18470.0412-0.02310.32250.04150.2209124.120854.038525.6353
504.719-4.25333.66554.6336-4.72435.32720.34390.743-0.1573-0.8252-0.7272-0.44380.8270.59460.27250.53430.11730.09840.47530.02150.3836121.572442.995415.7654
514.0725-1.33551.24174.4101-1.75265.83780.03040.3503-0.279-0.5594-0.2404-0.12530.40750.12990.21460.2770.0166-0.00550.28760.0050.2187113.171445.765519.204
524.4241-5.18233.07096.0539-2.82125.52880.44180.298-1.1892-0.5758-0.08591.06491.2252-0.242-0.3610.4664-0.0171-0.06710.3247-0.05650.4871110.246936.100816.7731
533.0468-1.2815-0.722.35130.12042.62590.01380.2594-0.2341-0.2187-0.1106-0.07670.43230.07340.10550.31090.07130.01560.27580.00030.2515114.89542.384719.9538
541.80620.2801-0.19971.33150.48082.0143-0.08470.0245-0.0903-0.17650.0433-0.28340.17030.06050.03240.27170.03590.02050.3140.03920.2692123.109951.160920.8032
555.1188-5.2881-2.5759.6363.20126.84120.06760.47940.4135-0.2501-0.0266-0.78820.10670.3308-0.02640.3642-0.05380.08220.47290.10080.3581129.905958.189412.1125
562.22891.6237-1.1524.6141-4.63486.91780.3706-0.092-1.3536-0.7575-0.5546-0.82841.00732.05330.1270.43040.17570.14790.71570.03720.6512137.041141.942917.3738
577.53692.95393.64473.0182.91453.143-0.40290.7571-1.2624-0.9112-0.0213-0.05440.0225-0.15990.19050.7170.12470.06820.6119-0.09390.5279123.181435.92814.039
588.3412-2.9354-2.19632.2741-1.4756.8408-0.15171.2391-0.16-0.5615-0.06940.26240.6151-0.37490.20850.51790.0106-0.00750.48010.03240.3547124.602521.654927.0539
596.2938-0.5371-2.29835.3369-0.23216.04320.12850.677-0.0872-0.4916-0.10140.5381-0.1701-0.49-0.0450.21830.0106-0.01210.2038-0.02010.1964119.755319.659734.6544
604.335-0.662-0.9221.99870.36683.34660.06480.07060.1294-0.06730.0371-0.1436-0.13190.0085-0.10440.2415-0.00050.05560.1260.00220.2049131.001521.952739.4018
613.48591.0327-1.0685.53741.98573.30930.1432-0.00270.4224-0.96770.1544-1.5097-0.28620.5011-0.29820.3353-0.04810.13210.2751-0.01380.3993144.045423.781246.2587
622.1054-1.1506-0.6263.4615-0.84871.63960.0743-0.05810.0672-0.0572-0.0386-0.3431-0.13460.1727-0.01440.2415-0.02080.03820.1717-0.00460.3152137.74719.27752.302
639.08335.66431.27953.78330.29514.56220.3906-0.6788-0.06450.9955-0.3255-1.1099-0.39960.6483-0.05010.3403-0.0761-0.03330.36-0.02570.3968144.193724.093959.7147
642.17521.5024-1.04614.2133-0.95172.0723-0.05690.0588-0.06640.02980.0818-0.5034-0.21170.2523-0.02330.2622-0.04680.04850.2053-0.02180.3687139.323423.345352.7615
654.5266-5.0386-0.12559.74660.34390.01490.09460.092-0.1496-0.2888-0.11560.10540.03830.07460.03070.3390.01910.0740.21940.00070.2963137.012613.50547.0417
663.1155-0.8965-1.73770.26540.51114.57230.3710.140.5018-0.275-0.0299-0.3663-0.5253-0.0194-0.34550.4055-0.00590.09710.21690.04550.3578135.562127.145236.9754
675.46794.1191-0.49785.88551.81033.1349-0.31720.40940.1289-1.20820.3757-0.91640.02520.4993-0.08830.45490.05450.19320.3634-0.01210.4665141.980814.690831.5817
687.8359-2.4469-3.43333.93661.8077.7520.60021.17251.4314-1.1071-0.1942-1.683-1.47480.9163-0.3420.6693-0.1370.25540.58070.06070.7242146.543932.072333.5036
697.88710.00243.8814.9849-1.23414.5786-0.1080.0486-0.50280.57060.0294-0.8847-1.21571.15060.06560.4248-0.07440.1190.3990.01430.7422149.123728.704748.4782
702.3681-2.86112.29149.3589-0.04647.4223-0.6728-0.26510.76620.78810.2009-0.6094-0.85450.37950.39510.4826-0.06340.02920.3619-0.06360.3905127.850727.915769.9264
712.5421-0.1022-1.01030.9043-0.57762.6910.0438-0.09070.13830.02870.0313-0.0856-0.25770.0426-0.05430.2859-0.0050.03170.1227-0.03110.2347125.865723.998159.906
722.6789-3.12931.43656.338-5.14095.1464-0.29820.0416-0.42640.19420.70660.9518-0.0106-0.8777-0.41010.27580.02830.0960.31130.00450.3822108.630420.783351.1828
731.4001-0.00060.18095.5129-1.1641.77850.01950.12370.0320.01820.14490.2891-0.0952-0.3339-0.15880.20460.01650.03820.22460.00790.2533114.393818.167346.0573
744.244-0.0594-0.33034.4296-0.45074.01170.0178-0.24140.32990.25670.12830.6341-0.3632-0.7062-0.10070.24550.04230.08230.2958-0.02650.2908110.795623.760464.5567
756.78434.97695.12349.05664.2074.3565-0.013-0.7125-0.3978-0.1896-0.22780.781-0.4709-1.46450.19110.41140.05520.11460.53660.04470.6683103.419924.653248.7834
766.9473-3.7506-0.61127.4153-1.68494.4412-0.2458-1.2854-0.23421.56310.1184-0.3628-0.44330.44880.11540.5378-0.1024-0.01110.71710.01190.208587.57898.813112.8393
772.72620.18090.65021.89030.48161.33370.1114-0.35170.13610.4015-0.0243-0.0521-0.16310.4492-0.04150.3353-0.1014-0.01250.5466-0.09180.184590.930911.4126103.1206
784.56942.41621.85538.34762.44214.45070.1491-0.5651.15870.104-0.43470.9817-0.854-0.1850.29050.4507-0.11450.17940.4066-0.12260.415485.411426.401991.9807
793.54761.17011.6734.54422.35272.7020.1943-0.20970.6835-0.16750.0043-0.1657-0.63220.3144-0.14260.3589-0.11950.11170.324-0.07410.317792.486523.483785.2853
805.28913.18582.92173.5822.39871.93760.1531-0.54080.5130.1483-0.20980.187-0.3002-0.01880.0510.2327-0.05340.02810.3158-0.06560.215384.743817.276188.2773
814.51151.82731.45673.0170.00921.94830.048-0.58040.7690.35090.07570.2782-0.7510.2091-0.07170.4613-0.08860.12640.4678-0.18030.361581.578522.5044103.1713
824.792-0.77022.24756.2195-4.14394.4350.273-0.2730.88650.0550.00040.7175-1.64280.3148-0.19870.5674-0.07350.08710.424-0.19680.711885.946933.432591.9081
833.3034-3.34-1.11248.2157-1.60694.99920.2918-0.27830.7239-0.28140.0106-0.4007-0.87510.3479-0.23180.4167-0.19970.12880.5307-0.1190.4714110.563821.317778.7895
845.19451.4321.49663.34172.0791.78750.16040.06670.493-0.77830.1802-0.3141-0.94530.6994-0.31420.3759-0.230.10060.4737-0.06560.3161102.025821.902581.6685
850.43230.6076-0.41983.09731.76283.46260.1208-0.51510.17540.2634-0.0838-0.2996-0.00250.7471-0.16420.1825-0.1251-0.0340.6121-0.13560.2964106.167812.462388.3969
862.24280.34832.6653.52462.56254.61820.2564-0.512-0.59750.9219-0.0497-0.77450.76351.0559-0.85280.2794-0.0376-0.21341.0874-0.07720.388109.63120.387796.6932
871.23780.84511.64041.31260.94452.54130.1317-0.47680.00260.19210.0609-0.44930.22210.6906-0.19320.2926-0.0251-0.08640.6328-0.04790.261799.94861.660296.5388
885.2944-0.45986.90840.5618-0.64368.96280.2573-1.4016-0.67770.68760.004-0.13630.84760.3447-0.48480.47090.0919-0.14211.01860.09520.3172101.0166-3.4053106.0721
891.23221.31461.20231.51.23271.94350.0581-0.3482-0.14120.24580.1448-0.37250.21470.8763-0.24810.27260.0106-0.08980.7115-0.06210.2808101.5342.019495.7018
902.99422.03023.12223.5120.93794.2230.1744-0.9155-0.0282-0.6098-0.6556-0.73110.30810.7562-0.69550.0237-0.2074-0.13420.8155-0.16870.2929111.680110.253187.2423
911.69011.46570.99494.01880.11110.80190.3351-0.5728-0.11850.2646-0.0102-1.87610.07541.3546-0.19690.38370.1054-0.14951.3191-0.14330.9661120.97263.46388.9586
922.27450.0917-0.40433.79550.56840.2051-0.0807-0.9721-0.67740.9418-0.3045-0.24010.53141.1106-0.86210.34760.0828-0.46591.4884-0.15650.4828113.4412-1.9376102.2972
930.2775-0.7746-0.00541.86150.19551.2779-0.3907-0.2537-0.43830.16770.0305-0.42610.58430.64230.24090.44980.17170.16370.37040.09040.5269147.2027-9.033949.709
942.12320.3478-0.23310.6182-0.84351.7823-0.46980.349-0.66060.07710.07230.21850.5320.08860.04950.52580.09130.2370.12210.0030.5384136.2033-10.417944.7657
950.96070.93430.55112.0331-3.04651.8798-0.43930.8933-0.8312-1.19160.03780.08630.9163-0.3208-0.21570.7656-0.14160.22070.2897-0.1380.6133123.8938-11.65535.4119
960.3232-0.3879-0.19442.9954-0.32471.3417-0.24270.2096-0.5708-0.2648-0.10480.33730.6157-0.27140.22180.4594-0.080.13880.246-0.10240.5238120.5036-8.377742.9882
971.75340.51630.46324.0457-1.64791.2745-0.14660.4613-0.7247-0.47010.02640.24250.68920.13810.03870.61110.02390.20740.3336-0.11310.5737136.3899-13.519733.8313
988.7351-2.1762-1.13134.8391.01784.3709-0.43270.9963-0.8875-0.8842-0.52240.90910.4975-1.14680.7880.8706-0.14180.00010.5579-0.29290.7698119.7767-17.184932.9058
995.615-0.5647-0.02592.85342.50466.741-0.40630.5654-1.2244-0.63870.26630.4649-0.4029-0.817-0.19360.6069-0.10960.35440.36960.06150.6912110.0158-13.262360.0615
1001.1905-0.5376-0.87614.13231.33222.7164-0.28480.0191-0.5819-0.06450.03180.16190.4038-0.17440.16270.3774-0.03360.19450.19940.01750.4596116.9717-8.468258.8667
1012.1143-0.6181-0.00452.32670.17721.1432-0.4529-0.8306-0.83030.41460.0987-0.19310.75880.44910.13460.69860.05910.3576-0.1260.13650.6667124.6445-13.755857.559
1022.5093-2.49182.03253.6857-3.12652.5917-0.7325-1.2721-0.31770.88380.2986-0.6260.25930.4401-0.03020.77480.2710.28930.2730.31250.557135.5317-7.850268.7371
1030.910.81610.12944.1118-0.02021.4562-0.2746-0.3013-0.27250.67290.11190.04530.37920.26670.10550.42220.12370.10530.25080.07040.3892136.5693-1.884860.7669
1046.0146-5.23354.30246.0195-3.48163.1509-0.379-0.2635-0.10230.5803-0.1935-1.05440.37641.10370.43560.51650.2430.0440.64270.23280.6431147.1624-4.839863.5314
1050.5312-1.23530.40043.4097-1.22150.467-0.4173-0.3905-0.33750.32630.0786-0.18770.43110.44410.2570.52970.18540.14060.34430.14840.4765138.788-6.561862.4488
1060.50581.29440.40639.42240.50930.6433-0.3451-0.4212-0.48570.5980.11640.23130.47870.21180.12660.43670.08830.2030.24030.0730.494130.3703-5.351161.4858
1072.7737-1.34260.85125.67690.20490.4144-0.3785-0.5129-0.44920.59320.1145-0.08630.4653-0.06530.21480.50150.08130.1920.33070.12590.429120.3166-5.550671.2459
1088.9437-2.90120.79376.8848-0.79684.7829-0.9206-1.4455-0.90551.5906-0.0739-0.89060.92620.45360.941.10170.12330.08010.70760.25820.6028127.625-15.238779.9443
1098.38525.0516-1.17466.59030.04811.7844-0.3632-1.4434-0.70230.7602-0.1636-0.45160.4090.63240.30830.8470.29150.04590.59160.19810.6013139.6429-10.420573.8506
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection details
1X-RAY DIFFRACTION1CHAIN 'A' AND (RESID 3 THROUGH 12 )
2X-RAY DIFFRACTION2CHAIN 'A' AND (RESID 13 THROUGH 60 )
3X-RAY DIFFRACTION3CHAIN 'A' AND (RESID 61 THROUGH 74 )
4X-RAY DIFFRACTION4CHAIN 'A' AND (RESID 75 THROUGH 102 )
5X-RAY DIFFRACTION5CHAIN 'A' AND (RESID 103 THROUGH 148 )
6X-RAY DIFFRACTION6CHAIN 'A' AND (RESID 149 THROUGH 170 )
7X-RAY DIFFRACTION7CHAIN 'A' AND (RESID 171 THROUGH 184 )
8X-RAY DIFFRACTION8CHAIN 'B' AND (RESID 3 THROUGH 60 )
9X-RAY DIFFRACTION9CHAIN 'B' AND (RESID 61 THROUGH 74 )
10X-RAY DIFFRACTION10CHAIN 'B' AND (RESID 75 THROUGH 102 )
11X-RAY DIFFRACTION11CHAIN 'B' AND (RESID 103 THROUGH 123 )
12X-RAY DIFFRACTION12CHAIN 'B' AND (RESID 124 THROUGH 148 )
13X-RAY DIFFRACTION13CHAIN 'B' AND (RESID 149 THROUGH 161 )
14X-RAY DIFFRACTION14CHAIN 'B' AND (RESID 162 THROUGH 170 )
15X-RAY DIFFRACTION15CHAIN 'B' AND (RESID 171 THROUGH 185 )
16X-RAY DIFFRACTION16CHAIN 'C' AND (RESID 3 THROUGH 12 )
17X-RAY DIFFRACTION17CHAIN 'C' AND (RESID 13 THROUGH 60 )
18X-RAY DIFFRACTION18CHAIN 'C' AND (RESID 61 THROUGH 75 )
19X-RAY DIFFRACTION19CHAIN 'C' AND (RESID 76 THROUGH 119 )
20X-RAY DIFFRACTION20CHAIN 'C' AND (RESID 120 THROUGH 137 )
21X-RAY DIFFRACTION21CHAIN 'C' AND (RESID 138 THROUGH 161 )
22X-RAY DIFFRACTION22CHAIN 'C' AND (RESID 162 THROUGH 171 )
23X-RAY DIFFRACTION23CHAIN 'C' AND (RESID 172 THROUGH 185 )
24X-RAY DIFFRACTION24CHAIN 'D' AND (RESID 3 THROUGH 12 )
25X-RAY DIFFRACTION25CHAIN 'D' AND (RESID 13 THROUGH 30 )
26X-RAY DIFFRACTION26CHAIN 'D' AND (RESID 31 THROUGH 60 )
27X-RAY DIFFRACTION27CHAIN 'D' AND (RESID 61 THROUGH 74 )
28X-RAY DIFFRACTION28CHAIN 'D' AND (RESID 75 THROUGH 90 )
29X-RAY DIFFRACTION29CHAIN 'D' AND (RESID 91 THROUGH 102 )
30X-RAY DIFFRACTION30CHAIN 'D' AND (RESID 103 THROUGH 123 )
31X-RAY DIFFRACTION31CHAIN 'D' AND (RESID 124 THROUGH 148 )
32X-RAY DIFFRACTION32CHAIN 'D' AND (RESID 149 THROUGH 161 )
33X-RAY DIFFRACTION33CHAIN 'D' AND (RESID 162 THROUGH 171 )
34X-RAY DIFFRACTION34CHAIN 'D' AND (RESID 172 THROUGH 185 )
35X-RAY DIFFRACTION35CHAIN 'E' AND (RESID 3 THROUGH 12 )
36X-RAY DIFFRACTION36CHAIN 'E' AND (RESID 13 THROUGH 30 )
37X-RAY DIFFRACTION37CHAIN 'E' AND (RESID 31 THROUGH 44 )
38X-RAY DIFFRACTION38CHAIN 'E' AND (RESID 45 THROUGH 60 )
39X-RAY DIFFRACTION39CHAIN 'E' AND (RESID 61 THROUGH 74 )
40X-RAY DIFFRACTION40CHAIN 'E' AND (RESID 75 THROUGH 90 )
41X-RAY DIFFRACTION41CHAIN 'E' AND (RESID 91 THROUGH 102 )
42X-RAY DIFFRACTION42CHAIN 'E' AND (RESID 103 THROUGH 119 )
43X-RAY DIFFRACTION43CHAIN 'E' AND (RESID 120 THROUGH 148 )
44X-RAY DIFFRACTION44CHAIN 'E' AND (RESID 149 THROUGH 161 )
45X-RAY DIFFRACTION45CHAIN 'E' AND (RESID 162 THROUGH 171 )
46X-RAY DIFFRACTION46CHAIN 'E' AND (RESID 172 THROUGH 185 )
47X-RAY DIFFRACTION47CHAIN 'F' AND (RESID 3 THROUGH 12 )
48X-RAY DIFFRACTION48CHAIN 'F' AND (RESID 13 THROUGH 30 )
49X-RAY DIFFRACTION49CHAIN 'F' AND (RESID 31 THROUGH 60 )
50X-RAY DIFFRACTION50CHAIN 'F' AND (RESID 61 THROUGH 74 )
51X-RAY DIFFRACTION51CHAIN 'F' AND (RESID 75 THROUGH 90 )
52X-RAY DIFFRACTION52CHAIN 'F' AND (RESID 91 THROUGH 102 )
53X-RAY DIFFRACTION53CHAIN 'F' AND (RESID 103 THROUGH 119 )
54X-RAY DIFFRACTION54CHAIN 'F' AND (RESID 120 THROUGH 148 )
55X-RAY DIFFRACTION55CHAIN 'F' AND (RESID 149 THROUGH 161 )
56X-RAY DIFFRACTION56CHAIN 'F' AND (RESID 162 THROUGH 171 )
57X-RAY DIFFRACTION57CHAIN 'F' AND (RESID 172 THROUGH 185 )
58X-RAY DIFFRACTION58CHAIN 'G' AND (RESID 3 THROUGH 12 )
59X-RAY DIFFRACTION59CHAIN 'G' AND (RESID 13 THROUGH 30 )
60X-RAY DIFFRACTION60CHAIN 'G' AND (RESID 31 THROUGH 60 )
61X-RAY DIFFRACTION61CHAIN 'G' AND (RESID 61 THROUGH 74 )
62X-RAY DIFFRACTION62CHAIN 'G' AND (RESID 75 THROUGH 90 )
63X-RAY DIFFRACTION63CHAIN 'G' AND (RESID 91 THROUGH 102 )
64X-RAY DIFFRACTION64CHAIN 'G' AND (RESID 103 THROUGH 119 )
65X-RAY DIFFRACTION65CHAIN 'G' AND (RESID 120 THROUGH 131 )
66X-RAY DIFFRACTION66CHAIN 'G' AND (RESID 132 THROUGH 148 )
67X-RAY DIFFRACTION67CHAIN 'G' AND (RESID 149 THROUGH 161 )
68X-RAY DIFFRACTION68CHAIN 'G' AND (RESID 162 THROUGH 171 )
69X-RAY DIFFRACTION69CHAIN 'G' AND (RESID 172 THROUGH 185 )
70X-RAY DIFFRACTION70CHAIN 'H' AND (RESID 3 THROUGH 12 )
71X-RAY DIFFRACTION71CHAIN 'H' AND (RESID 13 THROUGH 60 )
72X-RAY DIFFRACTION72CHAIN 'H' AND (RESID 61 THROUGH 74 )
73X-RAY DIFFRACTION73CHAIN 'H' AND (RESID 75 THROUGH 137 )
74X-RAY DIFFRACTION74CHAIN 'H' AND (RESID 138 THROUGH 170 )
75X-RAY DIFFRACTION75CHAIN 'H' AND (RESID 171 THROUGH 185 )
76X-RAY DIFFRACTION76CHAIN 'I' AND (RESID 3 THROUGH 12 )
77X-RAY DIFFRACTION77CHAIN 'I' AND (RESID 13 THROUGH 60 )
78X-RAY DIFFRACTION78CHAIN 'I' AND (RESID 61 THROUGH 74 )
79X-RAY DIFFRACTION79CHAIN 'I' AND (RESID 75 THROUGH 114 )
80X-RAY DIFFRACTION80CHAIN 'I' AND (RESID 115 THROUGH 131 )
81X-RAY DIFFRACTION81CHAIN 'I' AND (RESID 132 THROUGH 170 )
82X-RAY DIFFRACTION82CHAIN 'I' AND (RESID 171 THROUGH 185 )
83X-RAY DIFFRACTION83CHAIN 'J' AND (RESID 3 THROUGH 12 )
84X-RAY DIFFRACTION84CHAIN 'J' AND (RESID 13 THROUGH 30 )
85X-RAY DIFFRACTION85CHAIN 'J' AND (RESID 31 THROUGH 60 )
86X-RAY DIFFRACTION86CHAIN 'J' AND (RESID 61 THROUGH 74 )
87X-RAY DIFFRACTION87CHAIN 'J' AND (RESID 75 THROUGH 90 )
88X-RAY DIFFRACTION88CHAIN 'J' AND (RESID 91 THROUGH 102 )
89X-RAY DIFFRACTION89CHAIN 'J' AND (RESID 103 THROUGH 131 )
90X-RAY DIFFRACTION90CHAIN 'J' AND (RESID 132 THROUGH 154 )
91X-RAY DIFFRACTION91CHAIN 'J' AND (RESID 155 THROUGH 171 )
92X-RAY DIFFRACTION92CHAIN 'J' AND (RESID 172 THROUGH 185 )
93X-RAY DIFFRACTION93CHAIN 'K' AND (RESID 3 THROUGH 30 )
94X-RAY DIFFRACTION94CHAIN 'K' AND (RESID 31 THROUGH 60 )
95X-RAY DIFFRACTION95CHAIN 'K' AND (RESID 61 THROUGH 73 )
96X-RAY DIFFRACTION96CHAIN 'K' AND (RESID 74 THROUGH 132 )
97X-RAY DIFFRACTION97CHAIN 'K' AND (RESID 133 THROUGH 171 )
98X-RAY DIFFRACTION98CHAIN 'K' AND (RESID 172 THROUGH 185 )
99X-RAY DIFFRACTION99CHAIN 'L' AND (RESID 2 THROUGH 11 )
100X-RAY DIFFRACTION100CHAIN 'L' AND (RESID 12 THROUGH 44 )
101X-RAY DIFFRACTION101CHAIN 'L' AND (RESID 45 THROUGH 60 )
102X-RAY DIFFRACTION102CHAIN 'L' AND (RESID 61 THROUGH 75 )
103X-RAY DIFFRACTION103CHAIN 'L' AND (RESID 76 THROUGH 90 )
104X-RAY DIFFRACTION104CHAIN 'L' AND (RESID 91 THROUGH 102 )
105X-RAY DIFFRACTION105CHAIN 'L' AND (RESID 103 THROUGH 119 )
106X-RAY DIFFRACTION106CHAIN 'L' AND (RESID 120 THROUGH 137 )
107X-RAY DIFFRACTION107CHAIN 'L' AND (RESID 138 THROUGH 161 )
108X-RAY DIFFRACTION108CHAIN 'L' AND (RESID 162 THROUGH 170 )
109X-RAY DIFFRACTION109CHAIN 'L' AND (RESID 171 THROUGH 185 )

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