Entry Database : PDB / ID : 5czd Structure visualization Downloads & linksTitle The complex structure of VinK with VinL ComponentsAcyl-carrier-protein Malonyl-CoA-[acyl-carrier-protein] transacylase DetailsKeywords TRANSFERASE / acyl carrier protein / polyketide biosynthesisFunction / homology Function and homology informationFunction Domain/homology Component
[acyl-carrier-protein] S-malonyltransferase / [acyl-carrier-protein] S-malonyltransferase activity / fatty acid biosynthetic process / metal ion binding / cytosol Similarity search - Function : / VinK acyltransferase small domain / Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 / Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 / ACP-like / Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A / Acyl transferase domain superfamily / Acyl transferase/acyl hydrolase/lysophospholipase / Phosphopantetheine attachment site / Phosphopantetheine attachment site. ... : / VinK acyltransferase small domain / Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 / Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 / ACP-like / Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A / Acyl transferase domain superfamily / Acyl transferase/acyl hydrolase/lysophospholipase / Phosphopantetheine attachment site / Phosphopantetheine attachment site. / Phosphopantetheine attachment site / ACP-like superfamily / Carrier protein (CP) domain profile. / Phosphopantetheine binding ACP domain / Orthogonal Bundle / 3-Layer(aba) Sandwich / Mainly Alpha / Alpha Beta Similarity search - Domain/homology 1,1'-ethane-1,2-diyldipyrrolidine-2,5-dione / 4'-PHOSPHOPANTETHEINE / Acyl-carrier-protein / [acyl-carrier-protein] S-malonyltransferase Similarity search - ComponentBiological species Streptomyces halstedii (bacteria)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 2.34 Å DetailsAuthors Miyanaga, A. / Iwasawa, S. / Shinohara, Y. / Kudo, F. / Eguchi, T. Funding support Japan, 1items Details Hide detailsOrganization Grant number Country Japan Society for the Promotion of Science 15K18679 Japan
CitationJournal : Proc.Natl.Acad.Sci.USA / Year : 2016Title : Structure-based analysis of the molecular interactions between acyltransferase and acyl carrier protein in vicenistatin biosynthesis.Authors : Miyanaga, A. / Iwasawa, S. / Shinohara, Y. / Kudo, F. / Eguchi, T. History Deposition Jul 31, 2015 Deposition site : RCSB / Processing site : PDBJRevision 1.0 Feb 3, 2016 Provider : repository / Type : Initial releaseRevision 1.1 Feb 24, 2016 Group : Database referencesRevision 1.2 Mar 30, 2016 Group : Database referencesRevision 1.3 Feb 19, 2020 Group : Data collection / Database references / Derived calculationsCategory : citation / diffrn_source / pdbx_struct_oper_listItem : _citation.journal_id_CSD / _diffrn_source.pdbx_synchrotron_site / _pdbx_struct_oper_list.symmetry_operationRevision 1.4 Nov 8, 2023 Group : Data collection / Database references ... Data collection / Database references / Derived calculations / Refinement description Category : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_conn Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_conn.pdbx_leaving_atom_flag
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