Entry Database : PDB / ID : 5azg Structure visualization Downloads & linksTitle Crystal structure of LGG-1 complexed with a UNC-51 peptide ComponentsProtein lgg-1 Serine/threonine-protein kinase unc-51 DetailsKeywords PROTEIN BINDING / autophagy / ubiquitin-likeFunction / homology Function and homology informationFunction Domain/homology Component
TBC/RABGAPs / Receptor Mediated Mitophagy / dauer larval development / Macroautophagy / nematode male tail tip morphogenesis / cellular response to toxic substance / xenophagy / positive regulation of autophagosome assembly / GABA receptor binding / plasma membrane repair ... TBC/RABGAPs / Receptor Mediated Mitophagy / dauer larval development / Macroautophagy / nematode male tail tip morphogenesis / cellular response to toxic substance / xenophagy / positive regulation of autophagosome assembly / GABA receptor binding / plasma membrane repair / cellular response to nitrogen starvation / phosphatidylethanolamine binding / programmed cell death / phagophore assembly site / apoptotic cell clearance / embryo development ending in birth or egg hatching / regulation of axon extension / regulation of cell size / necroptotic process / autophagosome membrane / autophagosome maturation / autophagosome assembly / regulation of multicellular organism growth / autophagosome / lysosomal lumen / axonogenesis / determination of adult lifespan / macroautophagy / axon guidance / autophagy / phagocytic vesicle membrane / regulation of protein localization / cell migration / response to heat / perikaryon / mitochondrial outer membrane / protein autophosphorylation / non-specific serine/threonine protein kinase / defense response to Gram-positive bacterium / protein kinase activity / neuron projection / axon / protein phosphorylation / protein serine/threonine kinase activity / neuronal cell body / ubiquitin protein ligase binding / dendrite / ATP binding / nucleus / metal ion binding / plasma membrane / cytoplasm / cytosol Similarity search - Function Serine/threonine-protein kinase Unc-51 / Serine/threonine-protein kinase Atg1-like, tMIT domain / Atg1-like, MIT domain 1 / Autophagy protein Atg8 ubiquitin-like / Autophagy protein Atg8 ubiquitin like / Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 / Ubiquitin-like (UB roll) / Ubiquitin-like domain superfamily / Serine/threonine-protein kinase, active site / Serine/Threonine protein kinases active-site signature. ... Serine/threonine-protein kinase Unc-51 / Serine/threonine-protein kinase Atg1-like, tMIT domain / Atg1-like, MIT domain 1 / Autophagy protein Atg8 ubiquitin-like / Autophagy protein Atg8 ubiquitin like / Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 / Ubiquitin-like (UB roll) / Ubiquitin-like domain superfamily / Serine/threonine-protein kinase, active site / Serine/Threonine protein kinases active-site signature. / Protein kinase domain / Serine/Threonine protein kinases, catalytic domain / Roll / Protein kinase, ATP binding site / Protein kinases ATP-binding region signature. / Protein kinase domain profile. / Protein kinase domain / Protein kinase-like domain superfamily / Alpha Beta Similarity search - Domain/homologyBiological species Caenorhabditis elegans (invertebrata)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.81 Å DetailsAuthors Watanabe, Y. / Fujioka, Y. / Noda, N.N. Funding support Japan, 2items Details Hide detailsOrganization Grant number Country Ministry of Education, Culture, Sports, Science and Technology of Japan 25111004 Japan Japan Science and Technology Agency CREST Japan
CitationJournal : Mol.Cell / Year : 2015Title : Structural Basis of the Differential Function of the Two C. elegans Atg8 Homologs, LGG-1 and LGG-2, in Autophagy.Authors : Wu, F. / Watanabe, Y. / Guo, X.Y. / Qi, X. / Wang, P. / Zhao, H.Y. / Wang, Z. / Fujioka, Y. / Zhang, H. / Ren, J.Q. / Fang, T.C. / Shen, Y.X. / Feng, W. / Hu, J.J. / Noda, N.N. / Zhang, H. History Deposition Oct 5, 2015 Deposition site : PDBJ / Processing site : PDBJRevision 1.0 Dec 30, 2015 Provider : repository / Type : Initial releaseRevision 1.1 Jan 1, 2020 Group : Data collection / Database references / Derived calculationsCategory : citation / diffrn_source / pdbx_struct_oper_listItem : _citation.journal_id_CSD / _citation.pdbx_database_id_PubMed ... _citation.journal_id_CSD / _citation.pdbx_database_id_PubMed / _citation.title / _diffrn_source.pdbx_synchrotron_site / _pdbx_struct_oper_list.symmetry_operation Revision 1.2 Nov 8, 2023 Group : Data collection / Database references ... Data collection / Database references / Derived calculations / Refinement description Category : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / pdbx_struct_conn_angle / struct_conn Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession ... _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _pdbx_struct_conn_angle.ptnr1_auth_asym_id / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_asym_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr1_symmetry / _pdbx_struct_conn_angle.ptnr2_auth_asym_id / _pdbx_struct_conn_angle.ptnr2_auth_seq_id / _pdbx_struct_conn_angle.ptnr2_label_asym_id / _pdbx_struct_conn_angle.ptnr2_symmetry / _pdbx_struct_conn_angle.ptnr3_auth_asym_id / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.ptnr3_symmetry / _pdbx_struct_conn_angle.value / _struct_conn.pdbx_dist_value / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr1_symmetry / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_conn.ptnr2_symmetry
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