Entry Database : PDB / ID : 4z9x Structure visualization Downloads & linksTitle Crystal structure of 2-keto-3-deoxy-D-gluconate dehydrogenase from Streptococcus pyogenes ComponentsGluconate 5-dehydrogenase Details Keywords OXIDOREDUCTASE / Glycosaminoglycan metabolism / Short-chain dehydrogenase/reductase / Rossmann fold / NADH specificityFunction / homology Function and homology informationFunction Domain/homology Component
Short-chain dehydrogenase/reductase, conserved site / Short-chain dehydrogenases/reductases family signature. / Enoyl-(Acyl carrier protein) reductase / Short-chain dehydrogenase/reductase SDR / NAD(P)-binding Rossmann-like Domain / NAD(P)-binding domain superfamily / Rossmann fold / 3-Layer(aba) Sandwich / Alpha Beta Similarity search - Domain/homologyBiological species Streptococcus pyogenes serotype M1 (bacteria)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution : 1.7 Å DetailsAuthors Maruyama, Y. / Takase, R. / Oiki, S. / Mikami, B. / Murata, K. / Hashimoto, W. Funding support Japan, 4items Details Hide detailsOrganization Grant number Country Grants-in-aid from the Japan Society for the Promotion of Science Japan Program for Promotion of Basic Research Activities for Innovative Biosciences (PROBRAIN) of Japan Japan Targeted Proteins Research Program from the Ministry of Education, Culture, Sports, Science, and Technology (MEXT) of Japan Japan Research fellowships from the Japan Society for the Promotion of Science for Young Scientists Japan
CitationJournal : Proteins / Year : 2016Title : Structural determinants in bacterial 2-keto-3-deoxy-D-gluconate dehydrogenase KduD for dual-coenzyme specificityAuthors : Takase, R. / Maruyama, Y. / Oiki, S. / Mikami, B. / Murata, K. / Hashimoto, W. History Deposition Apr 13, 2015 Deposition site : RCSB / Processing site : PDBJRevision 1.0 Apr 29, 2015 Provider : repository / Type : Initial releaseRevision 1.1 Jun 22, 2016 Group : Database referencesRevision 1.2 Feb 19, 2020 Group : Data collection / Database references / Derived calculationsCategory : citation / diffrn_source / pdbx_struct_oper_listItem : _citation.journal_id_CSD / _diffrn_source.pdbx_synchrotron_site / _pdbx_struct_oper_list.symmetry_operationRevision 1.3 Nov 8, 2023 Group : Data collection / Database references / Refinement descriptionCategory : chem_comp_atom / chem_comp_bond ... chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item : _database_2.pdbx_DOI / _database_2.pdbx_database_accession
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