登録情報 データベース : PDB / ID : 4ys9 構造の表示 ダウンロードとリンクタイトル Ataxin-3 Carboxy-Terminal Region - Crystal C1 (tetragonal) 要素Maltose-binding periplasmic protein, Ataxin-3 chimera 詳細 キーワード TRANSCRIPTION / Ataxin-3 / Polyglutamine / Huntington's Disease / Triplet repeat disorder / ataxins / ataxia機能・相同性 機能・相同性情報分子機能 ドメイン・相同性 構成要素
protein localization to cytosolic proteasome complex / regulation of cell-substrate adhesion / positive regulation of ERAD pathway / monoubiquitinated protein deubiquitination / intermediate filament cytoskeleton organization / protein K48-linked deubiquitination / nuclear inclusion body / positive regulation of ubiquitin-dependent protein catabolic process / protein K63-linked deubiquitination / cellular response to misfolded protein ... protein localization to cytosolic proteasome complex / regulation of cell-substrate adhesion / positive regulation of ERAD pathway / monoubiquitinated protein deubiquitination / intermediate filament cytoskeleton organization / protein K48-linked deubiquitination / nuclear inclusion body / positive regulation of ubiquitin-dependent protein catabolic process / protein K63-linked deubiquitination / cellular response to misfolded protein / K48-linked deubiquitinase activity / K63-linked deubiquitinase activity / protein quality control for misfolded or incompletely synthesized proteins / carbohydrate transmembrane transporter activity / maltose binding / maltose transport / maltodextrin transmembrane transport / FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes / ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing / negative regulation of TORC1 signaling / cellular response to amino acid starvation / Josephin domain DUBs / mitochondrial membrane / nucleotide-excision repair / nuclear matrix / microtubule cytoskeleton organization / nervous system development / cellular response to heat / ATPase binding / outer membrane-bounded periplasmic space / actin cytoskeleton organization / ubiquitin-dependent protein catabolic process / chemical synaptic transmission / proteasome-mediated ubiquitin-dependent protein catabolic process / ubiquitinyl hydrolase 1 / cysteine-type deubiquitinase activity / mitochondrial matrix / lysosomal membrane / ubiquitin protein ligase binding / synapse / nucleolus / nucleoplasm / identical protein binding / nucleus / plasma membrane / cytoplasm / cytosol 類似検索 - 分子機能 Unstructured region C-term to UIM in Ataxin3 / Machado-Joseph disease protein / Josephin domain / Josephin / Josephin domain profile. / Josephin / Ubiquitin interaction motif / Ubiquitin-interacting motif. / Ubiquitin interacting motif / Ubiquitin-interacting motif (UIM) domain profile. ... Unstructured region C-term to UIM in Ataxin3 / Machado-Joseph disease protein / Josephin domain / Josephin / Josephin domain profile. / Josephin / Ubiquitin interaction motif / Ubiquitin-interacting motif. / Ubiquitin interacting motif / Ubiquitin-interacting motif (UIM) domain profile. / Maltose/Cyclodextrin ABC transporter, substrate-binding protein / Solute-binding family 1, conserved site / Bacterial extracellular solute-binding proteins, family 1 signature. / Bacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein 類似検索 - ドメイン・相同性 alpha-maltose / Maltose/maltodextrin-binding periplasmic protein / Ataxin-3 類似検索 - 構成要素生物種 Escherichia coli (大腸菌)Homo sapiens (ヒト)手法 X線回折 / シンクロトロン / 分子置換 / 解像度 : 2 Å 詳細データ登録者 Zhemkov, V.A. / Kim, M. 資金援助 米国, ロシア, 6件 詳細 詳細を隠す組織 認可番号 国 National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS) R01NS074376 米国 National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS) R01NS056224 米国 Russian Ministry of Science 11.G34.31.0056 ロシア Russian Scientific Fund 14-25-00024 ロシア Russian Ministry of Education and Science 17.1360.2014/K ロシア National Ataxia Foundation Translational Award 米国
引用ジャーナル : FEBS Open Bio / 年 : 2016タイトル : The 2.2-Angstrom resolution crystal structure of the carboxy-terminal region of ataxin-3.著者 : Zhemkov, V.A. / Kulminskaya, A.A. / Bezprozvanny, I.B. / Kim, M. 履歴 登録 2015年3月16日 登録サイト : RCSB / 処理サイト : RCSB改定 1.0 2016年3月9日 Provider : repository / タイプ : Initial release改定 1.1 2016年3月16日 Group : Database references改定 1.2 2017年9月6日 Group : Author supporting evidence / Derived calculations / カテゴリ : pdbx_audit_support / pdbx_struct_oper_listItem : _pdbx_audit_support.funding_organization / _pdbx_struct_oper_list.symmetry_operation改定 1.3 2017年11月22日 Group : Refinement description / カテゴリ : software / Item : _software.classification改定 1.4 2018年4月18日 Group : Data collection / Database references / カテゴリ : citationItem : _citation.journal_abbrev / _citation.pdbx_database_id_PubMed / _citation.title改定 1.5 2019年12月18日 Group : Author supporting evidence / カテゴリ : pdbx_audit_support / Item : _pdbx_audit_support.funding_organization改定 2.0 2020年7月29日 Group : Atomic model / Data collection ... Atomic model / Data collection / Derived calculations / Non-polymer description / Structure summary カテゴリ : atom_site / chem_comp ... atom_site / chem_comp / entity / entity_name_com / pdbx_branch_scheme / pdbx_chem_comp_identifier / pdbx_entity_branch / pdbx_entity_branch_descriptor / pdbx_entity_branch_link / pdbx_entity_branch_list / pdbx_entity_nonpoly / pdbx_molecule_features / pdbx_nonpoly_scheme / pdbx_struct_conn_angle / struct_conn / struct_conn_type / struct_site / struct_site_gen Item : _atom_site.B_iso_or_equiv / _atom_site.Cartn_x ... _atom_site.B_iso_or_equiv / _atom_site.Cartn_x / _atom_site.Cartn_y / _atom_site.Cartn_z / _atom_site.auth_asym_id / _atom_site.auth_atom_id / _atom_site.auth_comp_id / _atom_site.auth_seq_id / _atom_site.label_atom_id / _atom_site.label_comp_id / _chem_comp.formula / _chem_comp.formula_weight / _chem_comp.id / _chem_comp.mon_nstd_flag / _chem_comp.name / _chem_comp.type / _entity.formula_weight / _entity.pdbx_description / _entity.type / _pdbx_struct_conn_angle.ptnr1_auth_comp_id / _pdbx_struct_conn_angle.ptnr1_auth_seq_id / _pdbx_struct_conn_angle.ptnr1_label_asym_id / _pdbx_struct_conn_angle.ptnr1_label_atom_id / _pdbx_struct_conn_angle.ptnr1_label_comp_id / _pdbx_struct_conn_angle.ptnr1_label_seq_id / _pdbx_struct_conn_angle.ptnr1_symmetry / _pdbx_struct_conn_angle.ptnr2_symmetry / _pdbx_struct_conn_angle.ptnr3_auth_comp_id / _pdbx_struct_conn_angle.ptnr3_auth_seq_id / _pdbx_struct_conn_angle.ptnr3_label_asym_id / _pdbx_struct_conn_angle.ptnr3_label_atom_id / _pdbx_struct_conn_angle.ptnr3_label_comp_id / _pdbx_struct_conn_angle.ptnr3_label_seq_id / _pdbx_struct_conn_angle.ptnr3_symmetry / _pdbx_struct_conn_angle.value 解説 : Carbohydrate remediation / Provider : repository / タイプ : Remediation改定 2.1 2023年9月27日 Group : Data collection / Database references ... Data collection / Database references / Refinement description / Structure summary カテゴリ : chem_comp / chem_comp_atom ... chem_comp / chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model Item : _chem_comp.pdbx_synonyms / _database_2.pdbx_DOI / _database_2.pdbx_database_accession
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