Entry Database : PDB / ID : 4xlw Structure visualization Downloads & linksTitle Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF2) ComponentsDelta-like protein Neurogenic locus notch homolog protein 1 DetailsKeywords PROTEIN BINDING / glycosylation / EGF domains / receptor-ligand complexFunction / homology Function and homology informationFunction Domain/homology Component
ventral spinal cord interneuron fate commitment / regulation of neural retina development / Notch signaling involved in heart development / NOTCH3 Activation and Transmission of Signal to the Nucleus / regulation of cardioblast proliferation / regulation of inner ear auditory receptor cell differentiation / blood vessel lumenization / positive regulation of glial cell differentiation / venous blood vessel morphogenesis / dorsal aorta morphogenesis ... ventral spinal cord interneuron fate commitment / regulation of neural retina development / Notch signaling involved in heart development / NOTCH3 Activation and Transmission of Signal to the Nucleus / regulation of cardioblast proliferation / regulation of inner ear auditory receptor cell differentiation / blood vessel lumenization / positive regulation of glial cell differentiation / venous blood vessel morphogenesis / dorsal aorta morphogenesis / coronary sinus valve morphogenesis / cardiac right atrium morphogenesis / cardiac right ventricle formation / growth involved in heart morphogenesis / Notch signaling pathway involved in regulation of secondary heart field cardioblast proliferation / cell differentiation in spinal cord / venous endothelial cell differentiation / retinal cone cell differentiation / arterial endothelial cell differentiation / epithelial cell fate commitment / negative regulation of pro-B cell differentiation / negative regulation of inner ear auditory receptor cell differentiation / mitral valve formation / cell migration involved in endocardial cushion formation / glomerular mesangial cell development / negative regulation of photoreceptor cell differentiation / negative regulation of cell proliferation involved in heart valve morphogenesis / regulation of somitogenesis / endocardium morphogenesis / foregut morphogenesis / regulation of cell adhesion involved in heart morphogenesis / distal tubule development / inhibition of neuroepithelial cell differentiation / MAML1-RBP-Jkappa- ICN1 complex / regulation of epithelial cell proliferation involved in prostate gland development / cardiac chamber formation / auditory receptor cell fate commitment / positive regulation of aorta morphogenesis / positive regulation of viral transcription / negative regulation of endothelial cell chemotaxis / atrioventricular node development / positive regulation of transcription of Notch receptor target / neuroendocrine cell differentiation / collecting duct development / negative regulation of extracellular matrix constituent secretion / cellular response to tumor cell / positive regulation of apoptotic process involved in morphogenesis / compartment pattern specification / vasculogenesis involved in coronary vascular morphogenesis / T-helper 17 type immune response / endocardial cushion development / regulation of extracellular matrix assembly / chemical synaptic transmission, postsynaptic / endocardial cell differentiation / negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis / epithelial to mesenchymal transition involved in endocardial cushion formation / cardiac ventricle morphogenesis / positive regulation of smooth muscle cell differentiation / apoptotic process involved in embryonic digit morphogenesis / cardiac left ventricle morphogenesis / regulation of Notch signaling pathway / epidermal cell fate specification / mesenchymal cell development / negative regulation of collagen biosynthetic process / coronary vein morphogenesis / cardiac vascular smooth muscle cell development / negative regulation of myotube differentiation / left/right axis specification / somatic stem cell division / interleukin-17-mediated signaling pathway / negative regulation of cell adhesion molecule production / negative regulation of cardiac muscle hypertrophy / positive regulation of endothelial cell differentiation / endocardium development / positive regulation of cardiac epithelial to mesenchymal transition / secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development / cardiac epithelial to mesenchymal transition / glial cell differentiation / neuron fate commitment / negative regulation of catalytic activity / pericardium morphogenesis / cardiac atrium morphogenesis / cardiac muscle cell myoblast differentiation / negative regulation of calcium ion-dependent exocytosis / cellular response to follicle-stimulating hormone stimulus / cellular response to cholesterol / neuronal stem cell population maintenance / tissue regeneration / regulation of epithelial cell proliferation / calcium-ion regulated exocytosis / positive regulation of astrocyte differentiation / pulmonary valve morphogenesis / negative regulation of oligodendrocyte differentiation / tube formation / negative regulation of biomineral tissue development / regulation of stem cell proliferation / heart trabecula morphogenesis / coronary artery morphogenesis / negative regulation of cell-cell adhesion mediated by cadherin / luteolysis Similarity search - Function Protein jagged-1-like, atypical EGF2 / : / Delta/Serrate/lag-2 (DSL) protein / Notch ligand, N-terminal domain / Delta serrate ligand / N terminus of Notch ligand C2-like domain / DSL domain profile. / delta serrate ligand / Neurogenic locus notch homolog protein 1 / Notch, C-terminal ... Protein jagged-1-like, atypical EGF2 / : / Delta/Serrate/lag-2 (DSL) protein / Notch ligand, N-terminal domain / Delta serrate ligand / N terminus of Notch ligand C2-like domain / DSL domain profile. / delta serrate ligand / Neurogenic locus notch homolog protein 1 / Notch, C-terminal / Domain of unknown function / Notch / Notch, NOD domain / Notch, NODP domain / NOTCH protein / NOTCH protein / NOD / NODP / Notch-like domain superfamily / LNR domain / LNR (Lin-12/Notch) repeat profile. / Notch domain / Domain found in Notch and Lin-12 / EGF-like, conserved site / Human growth factor-like EGF / : / Calcium-binding EGF domain / Laminin / Laminin / EGF-like domain / EGF-type aspartate/asparagine hydroxylation site / EGF-like calcium-binding, conserved site / Calcium-binding EGF-like domain signature. / Aspartic acid and asparagine hydroxylation site. / EGF-like calcium-binding domain / Calcium-binding EGF-like domain / Epidermal growth factor-like domain. / Ankyrin repeat / EGF-like domain profile. / Growth factor receptor cysteine-rich domain superfamily / EGF-like domain signature 2. / EGF-like domain signature 1. / EGF-like domain / Ankyrin repeats (3 copies) / Ankyrin repeat profile. / Ankyrin repeat region circular profile. / ankyrin repeats / Ankyrin repeat / Ankyrin repeat-containing domain superfamily / Ribbon / Mainly Beta Similarity search - Domain/homologyBiological species Rattus norvegicus (Norway rat)Method X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / molecular replacement / Resolution : 3.39 Å DetailsAuthors Luca, V.C. / Jude, K.M. / Garcia, K.C. Funding support United States, 1items Details Hide detailsOrganization Grant number Country National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) NIH-1RO1-GM097015 United States
CitationJournal : Science / Year : 2015Title : Structural biology. Structural basis for Notch1 engagement of Delta-like 4.Authors : Luca, V.C. / Jude, K.M. / Pierce, N.W. / Nachury, M.V. / Fischer, S. / Garcia, K.C. History Deposition Jan 13, 2015 Deposition site : RCSB / Processing site : RCSBRevision 1.0 Mar 4, 2015 Provider : repository / Type : Initial releaseRevision 1.1 Mar 11, 2015 Group : Database referencesRevision 1.2 May 27, 2015 Group : Refinement descriptionRevision 1.3 Jun 10, 2015 Group : Refinement descriptionRevision 1.4 Sep 20, 2017 Group : Author supporting evidence / Derived calculations / Source and taxonomyCategory : entity_src_gen / pdbx_audit_support / pdbx_struct_oper_listItem : _entity_src_gen.pdbx_alt_source_flag / _pdbx_audit_support.funding_organization / _pdbx_struct_oper_list.symmetry_operationRevision 1.5 Dec 25, 2019 Group : Author supporting evidence / Data collection / Category : chem_comp / pdbx_audit_supportItem : _chem_comp.type / _pdbx_audit_support.funding_organizationRevision 1.6 Jul 29, 2020 Group : Data collection / Derived calculations / Structure summaryCategory : chem_comp / entity ... chem_comp / entity / pdbx_chem_comp_identifier / pdbx_entity_nonpoly / struct_conn / struct_conn_type / struct_site / struct_site_gen Item : _chem_comp.name / _chem_comp.type ... _chem_comp.name / _chem_comp.type / _entity.pdbx_description / _pdbx_entity_nonpoly.name / _struct_conn.conn_type_id / _struct_conn.id / _struct_conn.pdbx_dist_value / _struct_conn.pdbx_leaving_atom_flag / _struct_conn.pdbx_role / _struct_conn.ptnr1_auth_asym_id / _struct_conn.ptnr1_auth_comp_id / _struct_conn.ptnr1_auth_seq_id / _struct_conn.ptnr1_label_asym_id / _struct_conn.ptnr1_label_atom_id / _struct_conn.ptnr1_label_comp_id / _struct_conn.ptnr1_label_seq_id / _struct_conn.ptnr2_auth_asym_id / _struct_conn.ptnr2_auth_comp_id / _struct_conn.ptnr2_auth_seq_id / _struct_conn.ptnr2_label_asym_id / _struct_conn.ptnr2_label_atom_id / _struct_conn.ptnr2_label_comp_id / _struct_conn.ptnr2_label_seq_id / _struct_conn_type.id Description : Carbohydrate remediation / Provider : repository / Type : Remediation
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