Entry | Database: PDB / ID: 4riq |
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Title | Crystal structure of DPY-30 dimerization/docking domain in complex with Ash2L Sdc1-DPY-30 Interacting region (SDI) |
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Components | - Protein dpy-30 homolog
- Set1/Ash2 histone methyltransferase complex subunit ASH2
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Keywords | Transferase/Protein Binding / histone / chromatin / methylation / dimerization/docking module / allosteric regulator / Ash2L / WDR5 / RbBP5 / MLL1 / MLL2 / MLL3 / MLL4 / SET1A / SET1B / Transferase-Protein Binding complex |
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Function / homology | Function and homology information
MLL3/4 complex / Set1C/COMPASS complex / MLL1/2 complex / endosomal transport / histone methyltransferase complex / Formation of WDR5-containing histone-modifying complexes / MLL1 complex / hemopoiesis / transcription initiation-coupled chromatin remodeling / Deactivation of the beta-catenin transactivating complex ...MLL3/4 complex / Set1C/COMPASS complex / MLL1/2 complex / endosomal transport / histone methyltransferase complex / Formation of WDR5-containing histone-modifying complexes / MLL1 complex / hemopoiesis / transcription initiation-coupled chromatin remodeling / Deactivation of the beta-catenin transactivating complex / Formation of the beta-catenin:TCF transactivating complex / trans-Golgi network / RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function / euchromatin / PKMTs methylate histone lysines / beta-catenin binding / Activation of anterior HOX genes in hindbrain development during early embryogenesis / response to estrogen / transcription cis-regulatory region binding / DNA damage response / positive regulation of cell population proliferation / Golgi apparatus / protein homodimerization activity / positive regulation of transcription by RNA polymerase II / nucleoplasm / identical protein binding / nucleus / metal ion bindingSimilarity search - Function cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain / : / Sdc1/DPY30 / Dpy-30 motif / Dpy-30 motif / : / : / Set1/Ash2 histone methyltransferase complex subunit ASH2-like, WH / ASH2, PHD zinc finger / cAMP-dependent Protein Kinase, Chain A ...cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain / : / Sdc1/DPY30 / Dpy-30 motif / Dpy-30 motif / : / : / Set1/Ash2 histone methyltransferase complex subunit ASH2-like, WH / ASH2, PHD zinc finger / cAMP-dependent Protein Kinase, Chain A / Histone methyltransferase complex subunit ASH2 / SPRY domain / B30.2/SPRY domain / B30.2/SPRY domain profile. / B30.2/SPRY domain superfamily / Domain in SPla and the RYanodine Receptor. / SPRY domain / Concanavalin A-like lectin/glucanase domain superfamily / Up-down Bundle / Mainly AlphaSimilarity search - Domain/homology |
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Biological species | Homo sapiens (human) |
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Method | X-RAY DIFFRACTION / MOLECULAR REPLACEMENT / Resolution: 2.231 Å |
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Authors | Tremblay, V. / Couture, J.-F. |
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Citation | Journal: Structure / Year: 2014 Title: Molecular Basis for DPY-30 Association to COMPASS-like and NURF Complexes. Authors: Tremblay, V. / Zhang, P. / Chaturvedi, C.P. / Thornton, J. / Brunzelle, J.S. / Skiniotis, G. / Shilatifard, A. / Brand, M. / Couture, J.F. |
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History | Deposition | Oct 7, 2014 | Deposition site: RCSB / Processing site: RCSB |
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Revision 1.0 | Dec 17, 2014 | Provider: repository / Type: Initial release |
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Revision 1.1 | Feb 28, 2024 | Group: Data collection / Database references / Derived calculations Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / struct_ref_seq_dif / struct_site Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id |
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