登録情報 | データベース: PDB / ID: 4mlq |
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タイトル | Crystal structure of Bacillus megaterium porphobilinogen deaminase |
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要素 | Porphobilinogen deaminase |
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キーワード | TRANSFERASE / tetrapyrrole biosynthesis / porphobilinogen deaminase / dipyrromethane cofactor / three-domain fold / domains 1 and 2 resemble the fold of type II periplasmic binding proteins / pyrrole polymerisation |
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機能・相同性 | 機能・相同性情報
hydroxymethylbilane synthase / hydroxymethylbilane synthase activity / heme biosynthetic process / cytoplasm類似検索 - 分子機能 Porphobilinogen deaminase, C-terminal domain / Porphobilinogen deaminase / Porphobilinogen deaminase, N-terminal / Porphobilinogen deaminase, C-terminal / Porphobilinogen deaminase, dipyrromethane cofactor binding site / Porphobilinogen deaminase, C-terminal domain superfamily / Porphobilinogen deaminase, dipyromethane cofactor binding domain / Porphobilinogen deaminase, C-terminal domain / Porphobilinogen deaminase cofactor-binding site. / Double Stranded RNA Binding Domain ...Porphobilinogen deaminase, C-terminal domain / Porphobilinogen deaminase / Porphobilinogen deaminase, N-terminal / Porphobilinogen deaminase, C-terminal / Porphobilinogen deaminase, dipyrromethane cofactor binding site / Porphobilinogen deaminase, C-terminal domain superfamily / Porphobilinogen deaminase, dipyromethane cofactor binding domain / Porphobilinogen deaminase, C-terminal domain / Porphobilinogen deaminase cofactor-binding site. / Double Stranded RNA Binding Domain / Periplasmic binding protein-like II / D-Maltodextrin-Binding Protein; domain 2 / 2-Layer Sandwich / 3-Layer(aba) Sandwich / Alpha Beta類似検索 - ドメイン・相同性 Chem-29P / ACETIC ACID / Chem-DPM / Porphobilinogen deaminase類似検索 - 構成要素 |
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生物種 | Bacillus megaterium (バクテリア) |
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手法 | X線回折 / シンクロトロン / 分子置換 / 解像度: 1.6 Å |
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データ登録者 | Azim, N. / Deery, E. / Warren, M.J. / Erskine, P. / Cooper, J.B. / Coker, A. / Wood, S.P. / Akhtar, M. |
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引用 | ジャーナル: Acta Crystallogr.,Sect.D / 年: 2014 タイトル: Structural evidence for the partially oxidized dipyrromethene and dipyrromethanone forms of the cofactor of porphobilinogen deaminase: structures of the Bacillus megaterium enzyme at near-atomic resolution. 著者: Azim, N. / Deery, E. / Warren, M.J. / Wolfenden, B.A. / Erskine, P. / Cooper, J.B. / Coker, A. / Wood, S.P. / Akhtar, M. |
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履歴 | 登録 | 2013年9月6日 | 登録サイト: RCSB / 処理サイト: RCSB |
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改定 1.0 | 2014年4月2日 | Provider: repository / タイプ: Initial release |
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