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- PDB-4l3c: Structure of HLA-A2 in complex with D76N b2m mutant and NY-ESO1 d... -

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Basic information

Entry
Database: PDB / ID: 4l3c
TitleStructure of HLA-A2 in complex with D76N b2m mutant and NY-ESO1 double mutant
Components
  • Beta-2-microglobulinBeta-2 microglobulin
  • HLA class I histocompatibility antigen, A-2 alpha chain
  • NY-ESO1 double mutant (1Y, 9V)
KeywordsIMMUNE SYSTEM / MHC / beta-2 microglobulin / HLA_A0201 / NY-ESO1 / D76N variant / immunglobulin / beta sandwitch / amyloid aggregation
Function / homology
Function and homology information


T cell mediated cytotoxicity directed against tumor cell target / antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent / positive regulation of memory T cell activation / TAP complex binding / antigen processing and presentation of exogenous peptide antigen via MHC class I / Golgi medial cisterna / positive regulation of CD8-positive, alpha-beta T cell activation / CD8-positive, alpha-beta T cell activation / positive regulation of CD8-positive, alpha-beta T cell proliferation / CD8 receptor binding ...T cell mediated cytotoxicity directed against tumor cell target / antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent / positive regulation of memory T cell activation / TAP complex binding / antigen processing and presentation of exogenous peptide antigen via MHC class I / Golgi medial cisterna / positive regulation of CD8-positive, alpha-beta T cell activation / CD8-positive, alpha-beta T cell activation / positive regulation of CD8-positive, alpha-beta T cell proliferation / CD8 receptor binding / endoplasmic reticulum exit site / beta-2-microglobulin binding / TAP binding / protection from natural killer cell mediated cytotoxicity / antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-independent / antigen processing and presentation of endogenous peptide antigen via MHC class Ib / detection of bacterium / T cell receptor binding / positive regulation of ferrous iron binding / positive regulation of transferrin receptor binding / early endosome lumen / positive regulation of receptor binding / Nef mediated downregulation of MHC class I complex cell surface expression / DAP12 interactions / negative regulation of receptor binding / lumenal side of endoplasmic reticulum membrane / Endosomal/Vacuolar pathway / Antigen Presentation: Folding, assembly and peptide loading of class I MHC / antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent / cellular response to iron(III) ion / negative regulation of forebrain neuron differentiation / ER to Golgi transport vesicle membrane / peptide antigen assembly with MHC class I protein complex / response to molecule of bacterial origin / regulation of erythrocyte differentiation / regulation of iron ion transport / MHC class I peptide loading complex / HFE-transferrin receptor complex / T cell mediated cytotoxicity / cellular response to iron ion / antigen processing and presentation of endogenous peptide antigen via MHC class I / positive regulation of T cell cytokine production / MHC class I protein complex / multicellular organismal-level iron ion homeostasis / positive regulation of T cell mediated cytotoxicity / peptide antigen assembly with MHC class II protein complex / negative regulation of neurogenesis / MHC class II protein complex / positive regulation of receptor-mediated endocytosis / cellular response to nicotine / recycling endosome membrane / phagocytic vesicle membrane / specific granule lumen / peptide antigen binding / positive regulation of cellular senescence / antigen processing and presentation of exogenous peptide antigen via MHC class II / Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell / Interferon gamma signaling / positive regulation of immune response / negative regulation of epithelial cell proliferation / Modulation by Mtb of host immune system / positive regulation of T cell activation / Interferon alpha/beta signaling / positive regulation of type II interferon production / sensory perception of smell / negative regulation of neuron projection development / E3 ubiquitin ligases ubiquitinate target proteins / tertiary granule lumen / DAP12 signaling / MHC class II protein complex binding / late endosome membrane / T cell differentiation in thymus / positive regulation of protein binding / ER-Phagosome pathway / antibacterial humoral response / iron ion transport / T cell receptor signaling pathway / protein refolding / early endosome membrane / protein homotetramerization / intracellular iron ion homeostasis / amyloid fibril formation / learning or memory / defense response to Gram-positive bacterium / immune response / Amyloid fiber formation / lysosomal membrane / endoplasmic reticulum lumen / external side of plasma membrane / Golgi membrane / signaling receptor binding / focal adhesion / innate immune response / Neutrophil degranulation / endoplasmic reticulum membrane / SARS-CoV-2 activates/modulates innate and adaptive immune responses / structural molecule activity / Golgi apparatus / cell surface / endoplasmic reticulum
Similarity search - Function
MHC class I, alpha chain, C-terminal / MHC_I C-terminus / MHC class I-like antigen recognition-like / Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 / MHC class I alpha chain, alpha1 alpha2 domains / Class I Histocompatibility antigen, domains alpha 1 and 2 / Beta-2-Microglobulin / MHC class I-like antigen recognition-like / MHC class I-like antigen recognition-like superfamily / MHC classes I/II-like antigen recognition protein ...MHC class I, alpha chain, C-terminal / MHC_I C-terminus / MHC class I-like antigen recognition-like / Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 / MHC class I alpha chain, alpha1 alpha2 domains / Class I Histocompatibility antigen, domains alpha 1 and 2 / Beta-2-Microglobulin / MHC class I-like antigen recognition-like / MHC class I-like antigen recognition-like superfamily / MHC classes I/II-like antigen recognition protein / Immunoglobulin/major histocompatibility complex, conserved site / Immunoglobulins and major histocompatibility complex proteins signature. / Immunoglobulin C-Type / Immunoglobulin C1-set / Immunoglobulin C1-set domain / Ig-like domain profile. / Immunoglobulin-like domain / Immunoglobulin-like domain superfamily / Immunoglobulins / Immunoglobulin-like fold / Immunoglobulin-like / Sandwich / 2-Layer Sandwich / Mainly Beta / Alpha Beta
Similarity search - Domain/homology
HLA class I histocompatibility antigen, A alpha chain / HLA class I histocompatibility antigen, A alpha chain / Beta-2-microglobulin
Similarity search - Component
Biological speciesHomo sapiens (human)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.64 Å
AuthorsHalabelian, L. / Giorgetti, S. / Bellotti, V. / Bolognesi, M. / Ricagno, S.
CitationJournal: J.Biol.Chem. / Year: 2014
Title: Class I Major Histocompatibility Complex, the Trojan Horse for Secretion of Amyloidogenic beta 2-Microglobulin.
Authors: Halabelian, L. / Ricagno, S. / Giorgetti, S. / Santambrogio, C. / Barbiroli, A. / Pellegrino, S. / Achour, A. / Grandori, R. / Marchese, L. / Raimondi, S. / Mangione, P.P. / Esposito, G. / ...Authors: Halabelian, L. / Ricagno, S. / Giorgetti, S. / Santambrogio, C. / Barbiroli, A. / Pellegrino, S. / Achour, A. / Grandori, R. / Marchese, L. / Raimondi, S. / Mangione, P.P. / Esposito, G. / Al-Shawi, R. / Simons, J.P. / Speck, I. / Stoppini, M. / Bolognesi, M. / Bellotti, V.
History
DepositionJun 5, 2013Deposition site: RCSB / Processing site: RCSB
Revision 1.0Dec 25, 2013Provider: repository / Type: Initial release
Revision 1.1Jan 8, 2014Group: Database references
Revision 1.2Feb 26, 2014Group: Database references
Revision 1.3Sep 20, 2023Group: Data collection / Database references ...Data collection / Database references / Derived calculations / Refinement description
Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ncs_dom_lim / struct_ref_seq_dif / struct_site
Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession ..._database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ncs_dom_lim.beg_auth_comp_id / _struct_ncs_dom_lim.beg_label_asym_id / _struct_ncs_dom_lim.beg_label_comp_id / _struct_ncs_dom_lim.beg_label_seq_id / _struct_ncs_dom_lim.end_auth_comp_id / _struct_ncs_dom_lim.end_label_asym_id / _struct_ncs_dom_lim.end_label_comp_id / _struct_ncs_dom_lim.end_label_seq_id / _struct_ref_seq_dif.details / _struct_site.pdbx_auth_asym_id / _struct_site.pdbx_auth_comp_id / _struct_site.pdbx_auth_seq_id

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: HLA class I histocompatibility antigen, A-2 alpha chain
B: Beta-2-microglobulin
m: NY-ESO1 double mutant (1Y, 9V)
C: HLA class I histocompatibility antigen, A-2 alpha chain
D: Beta-2-microglobulin
i: NY-ESO1 double mutant (1Y, 9V)
E: HLA class I histocompatibility antigen, A-2 alpha chain
F: Beta-2-microglobulin
k: NY-ESO1 double mutant (1Y, 9V)
G: HLA class I histocompatibility antigen, A-2 alpha chain
H: Beta-2-microglobulin
f: NY-ESO1 double mutant (1Y, 9V)
I: HLA class I histocompatibility antigen, A-2 alpha chain
J: Beta-2-microglobulin
l: NY-ESO1 double mutant (1Y, 9V)
K: HLA class I histocompatibility antigen, A-2 alpha chain
L: Beta-2-microglobulin
h: NY-ESO1 double mutant (1Y, 9V)
M: HLA class I histocompatibility antigen, A-2 alpha chain
N: Beta-2-microglobulin
e: NY-ESO1 double mutant (1Y, 9V)
O: HLA class I histocompatibility antigen, A-2 alpha chain
P: Beta-2-microglobulin
n: NY-ESO1 double mutant (1Y, 9V)
Q: HLA class I histocompatibility antigen, A-2 alpha chain
R: Beta-2-microglobulin
p: NY-ESO1 double mutant (1Y, 9V)
S: HLA class I histocompatibility antigen, A-2 alpha chain
T: Beta-2-microglobulin
o: NY-ESO1 double mutant (1Y, 9V)
U: HLA class I histocompatibility antigen, A-2 alpha chain
V: Beta-2-microglobulin
c: NY-ESO1 double mutant (1Y, 9V)
W: HLA class I histocompatibility antigen, A-2 alpha chain
X: Beta-2-microglobulin
g: NY-ESO1 double mutant (1Y, 9V)
Y: HLA class I histocompatibility antigen, A-2 alpha chain
Z: Beta-2-microglobulin
q: NY-ESO1 double mutant (1Y, 9V)
a: HLA class I histocompatibility antigen, A-2 alpha chain
b: Beta-2-microglobulin
j: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)633,135100
Polymers629,94642
Non-polymers3,18958
Water2,414134
1
A: HLA class I histocompatibility antigen, A-2 alpha chain
B: Beta-2-microglobulin
m: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,1957
Polymers44,9963
Non-polymers1984
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4950 Å2
ΔGint-45 kcal/mol
Surface area19370 Å2
MethodPISA
2
C: HLA class I histocompatibility antigen, A-2 alpha chain
D: Beta-2-microglobulin
i: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,3799
Polymers44,9963
Non-polymers3836
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5350 Å2
ΔGint-47 kcal/mol
Surface area19320 Å2
MethodPISA
3
E: HLA class I histocompatibility antigen, A-2 alpha chain
F: Beta-2-microglobulin
k: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,1596
Polymers44,9963
Non-polymers1633
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4740 Å2
ΔGint-37 kcal/mol
Surface area19310 Å2
MethodPISA
4
G: HLA class I histocompatibility antigen, A-2 alpha chain
H: Beta-2-microglobulin
f: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,1596
Polymers44,9963
Non-polymers1633
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4760 Å2
ΔGint-32 kcal/mol
Surface area19530 Å2
MethodPISA
5
I: HLA class I histocompatibility antigen, A-2 alpha chain
J: Beta-2-microglobulin
l: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,2659
Polymers44,9963
Non-polymers2696
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5090 Å2
ΔGint-60 kcal/mol
Surface area19280 Å2
MethodPISA
6
K: HLA class I histocompatibility antigen, A-2 alpha chain
L: Beta-2-microglobulin
h: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,2517
Polymers44,9963
Non-polymers2554
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5000 Å2
ΔGint-35 kcal/mol
Surface area19510 Å2
MethodPISA
7
M: HLA class I histocompatibility antigen, A-2 alpha chain
N: Beta-2-microglobulin
e: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,1957
Polymers44,9963
Non-polymers1984
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4890 Å2
ΔGint-45 kcal/mol
Surface area19330 Å2
MethodPISA
8
O: HLA class I histocompatibility antigen, A-2 alpha chain
P: Beta-2-microglobulin
n: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,2517
Polymers44,9963
Non-polymers2554
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5020 Å2
ΔGint-35 kcal/mol
Surface area19510 Å2
MethodPISA
9
Q: HLA class I histocompatibility antigen, A-2 alpha chain
R: Beta-2-microglobulin
p: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,2659
Polymers44,9963
Non-polymers2696
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5120 Å2
ΔGint-57 kcal/mol
Surface area19330 Å2
MethodPISA
10
S: HLA class I histocompatibility antigen, A-2 alpha chain
T: Beta-2-microglobulin
o: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,2517
Polymers44,9963
Non-polymers2554
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area5050 Å2
ΔGint-34 kcal/mol
Surface area19340 Å2
MethodPISA
11
U: HLA class I histocompatibility antigen, A-2 alpha chain
V: Beta-2-microglobulin
c: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,1596
Polymers44,9963
Non-polymers1633
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4680 Å2
ΔGint-41 kcal/mol
Surface area19500 Å2
MethodPISA
12
W: HLA class I histocompatibility antigen, A-2 alpha chain
X: Beta-2-microglobulin
g: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,1957
Polymers44,9963
Non-polymers1984
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4870 Å2
ΔGint-46 kcal/mol
Surface area19410 Å2
MethodPISA
13
Y: HLA class I histocompatibility antigen, A-2 alpha chain
Z: Beta-2-microglobulin
q: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,2517
Polymers44,9963
Non-polymers2554
Water362
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4930 Å2
ΔGint-36 kcal/mol
Surface area19460 Å2
MethodPISA
14
a: HLA class I histocompatibility antigen, A-2 alpha chain
b: Beta-2-microglobulin
j: NY-ESO1 double mutant (1Y, 9V)
hetero molecules


Theoretical massNumber of molelcules
Total (without water)45,1596
Polymers44,9963
Non-polymers1633
Water181
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area4820 Å2
ΔGint-36 kcal/mol
Surface area19390 Å2
MethodPISA
Unit cell
Length a, b, c (Å)102.110, 314.500, 316.230
Angle α, β, γ (deg.)90.00, 90.00, 90.00
Int Tables number19
Space group name H-MP212121
Noncrystallographic symmetry (NCS)NCS domain:
IDEns-IDDetails
11A
21C
31E
41G
51I
61K
71M
81O
91Q
101S
111U
121W
131Y
141a
12B
22D
32F
42H
52J
62L
72N
82P
92R
102T
112V
122X
132Z
142b

NCS domain segments:

Component-ID: 1

Dom-IDEns-IDBeg auth comp-IDBeg label comp-IDEnd auth comp-IDEnd label comp-IDRefine codeAuth asym-IDLabel asym-IDAuth seq-IDLabel seq-ID
11GLYGLYPROPRO5AA1 - 2761 - 276
21GLYGLYPROPRO5CD1 - 2761 - 276
31GLYGLYPROPRO5EG1 - 2761 - 276
41GLYGLYPROPRO5GJ1 - 2761 - 276
51GLYGLYPROPRO5IM1 - 2761 - 276
61GLYGLYPROPRO5KP1 - 2761 - 276
71GLYGLYPROPRO5MS1 - 2761 - 276
81GLYGLYPROPRO5OV1 - 2761 - 276
91GLYGLYPROPRO5QY1 - 2761 - 276
101GLYGLYPROPRO5SBA1 - 2761 - 276
111GLYGLYPROPRO5UEA1 - 2761 - 276
121GLYGLYPROPRO5WHA1 - 2761 - 276
131GLYGLYPROPRO5YKA1 - 2761 - 276
141GLYGLYPROPRO5aNA1 - 2761 - 276
12ILEILEMETMET4BB1 - 992 - 100
22ILEILEMETMET4DE1 - 992 - 100
32ILEILEMETMET4FH1 - 992 - 100
42ILEILEMETMET4HK1 - 992 - 100
52ILEILEMETMET4JN1 - 992 - 100
62ILEILEMETMET4LQ1 - 992 - 100
72ILEILEMETMET4NT1 - 992 - 100
82ILEILEMETMET4PW1 - 992 - 100
92ILEILEMETMET4RZ1 - 992 - 100
102ILEILEMETMET4TCA1 - 992 - 100
112ILEILEMETMET4VFA1 - 992 - 100
122ILEILEMETMET4XIA1 - 992 - 100
132ILEILEMETMET4ZLA1 - 992 - 100
142ILEILEMETMET4bOA1 - 992 - 100

NCS ensembles :
ID
1
2

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Components

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Protein , 2 types, 28 molecules ACEGIKMOQSUWYaBDFHJLNPRTVXZb

#1: Protein
HLA class I histocompatibility antigen, A-2 alpha chain / MHC class I antigen A*2


Mass: 31951.316 Da / Num. of mol.: 14 / Fragment: UNP RESIDUES 25-300
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Homo sapiens (human) / Gene: HLA-A, HLAA, HLA_A0201 / Production host: Escherichia coli (E. coli) / Strain (production host): BL21(DE3) / References: UniProt: P01892, UniProt: P04439*PLUS
#2: Protein
Beta-2-microglobulin / Beta-2 microglobulin / Beta-2-microglobulin form pI 5.3


Mass: 11878.372 Da / Num. of mol.: 14 / Fragment: UNP RESIDUES 21-119 / Mutation: D76N
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Homo sapiens (human) / Gene: B2M, CDABP0092, HDCMA22P, NM_004048 / Production host: Escherichia coli (E. coli) / Strain (production host): BL21 / References: UniProt: P61769

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Protein/peptide , 1 types, 14 molecules mikflhenpocgqj

#3: Protein/peptide
NY-ESO1 double mutant (1Y, 9V)


Mass: 1166.431 Da / Num. of mol.: 14 / Source method: obtained synthetically

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Non-polymers , 3 types, 192 molecules

#4: Chemical...
ChemComp-CL / CHLORIDE ION / Chloride


Mass: 35.453 Da / Num. of mol.: 38 / Source method: obtained synthetically / Formula: Cl
#5: Chemical
ChemComp-GOL / GLYCEROL / GLYCERIN / PROPANE-1,2,3-TRIOL / Glycerol


Mass: 92.094 Da / Num. of mol.: 20 / Source method: obtained synthetically / Formula: C3H8O3
#6: Water ChemComp-HOH / water / Water


Mass: 18.015 Da / Num. of mol.: 134 / Source method: isolated from a natural source / Formula: H2O

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 4.03 Å3/Da / Density % sol: 69.48 %
Crystal growTemperature: 293 K / Method: vapor diffusion, sitting drop
Details: 1.9 M ammonium sulphate, 2% PEG 6K, 100 mM Tris-HCl, VAPOR DIFFUSION, SITTING DROP, temperature 293K
PH range: 8.0-8.2

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Data collection

DiffractionMean temperature: 110 K
Diffraction sourceSource: SYNCHROTRON / Site: ESRF / Beamline: ID14-4 / Wavelength: 0.9393 Å
DetectorType: ADSC QUANTUM 315r / Detector: CCD / Date: Sep 16, 2012
RadiationMonochromator: channel cut ESRF monochromator / Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 0.9393 Å / Relative weight: 1
Reflection twin
Crystal-IDIDOperatorDomain-IDFraction
11H, K, L10.801
11-H, L, K20.199
ReflectionResolution: 2.64→70.63 Å / Num. all: 294283 / Num. obs: 293400 / % possible obs: 99.7 % / Redundancy: 5.3 % / Rmerge(I) obs: 0.168 / Net I/σ(I): 6.8
Reflection shellResolution: 2.64→2.79 Å / Redundancy: 5.4 % / Rmerge(I) obs: 0.905 / Mean I/σ(I) obs: 1.9 / % possible all: 99.7

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Processing

Software
NameVersionClassification
MxCuBEdata collection
PHASERphasing
REFMAC5.5.0109refinement
MOSFLMdata reduction
SCALAdata scaling
RefinementMethod to determine structure: MOLECULAR REPLACEMENT
Starting model: PDB entry 1S9W

1s9w


Resolution: 2.64→66.48 Å / Cor.coef. Fo:Fc: 0.928 / Cor.coef. Fo:Fc free: 0.915 / SU B: 13.666 / SU ML: 0.136 / Cross valid method: THROUGHOUT / ESU R: 0.076 / ESU R Free: 0.05 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
RfactorNum. reflection% reflectionSelection details
Rfree0.21834 14628 5 %RANDOM
Rwork0.19914 ---
obs0.2001 278467 97.72 %-
Solvent computationIon probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK
Displacement parametersBiso mean: 38.669 Å2
Baniso -1Baniso -2Baniso -3
1--19.43 Å20 Å2-0 Å2
2--12.51 Å20 Å2
3---6.92 Å2
Refinement stepCycle: LAST / Resolution: 2.64→66.48 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms44422 0 158 134 44714
Refine LS restraints
Refine-IDTypeDev idealDev ideal targetNumber
X-RAY DIFFRACTIONr_bond_refined_d0.010.02145838
X-RAY DIFFRACTIONr_bond_other_d0.0010.0231410
X-RAY DIFFRACTIONr_angle_refined_deg1.2181.92362204
X-RAY DIFFRACTIONr_angle_other_deg0.796375516
X-RAY DIFFRACTIONr_dihedral_angle_1_deg6.25755348
X-RAY DIFFRACTIONr_dihedral_angle_2_deg30.84423.1432450
X-RAY DIFFRACTIONr_dihedral_angle_3_deg16.637157448
X-RAY DIFFRACTIONr_dihedral_angle_4_deg19.59815392
X-RAY DIFFRACTIONr_chiral_restr0.0750.26314
X-RAY DIFFRACTIONr_gen_planes_refined0.0050.02151324
X-RAY DIFFRACTIONr_gen_planes_other0.0010.0210150
X-RAY DIFFRACTIONr_nbd_refined
X-RAY DIFFRACTIONr_nbd_other
X-RAY DIFFRACTIONr_nbtor_refined
X-RAY DIFFRACTIONr_nbtor_other
X-RAY DIFFRACTIONr_xyhbond_nbd_refined
X-RAY DIFFRACTIONr_xyhbond_nbd_other
X-RAY DIFFRACTIONr_metal_ion_refined
X-RAY DIFFRACTIONr_metal_ion_other
X-RAY DIFFRACTIONr_symmetry_vdw_refined
X-RAY DIFFRACTIONr_symmetry_vdw_other
X-RAY DIFFRACTIONr_symmetry_hbond_refined
X-RAY DIFFRACTIONr_symmetry_hbond_other
X-RAY DIFFRACTIONr_symmetry_metal_ion_refined
X-RAY DIFFRACTIONr_symmetry_metal_ion_other
X-RAY DIFFRACTIONr_mcbond_it0.6511.526866
X-RAY DIFFRACTIONr_mcbond_other0.0921.510822
X-RAY DIFFRACTIONr_mcangle_it1.253243344
X-RAY DIFFRACTIONr_mcangle_other
X-RAY DIFFRACTIONr_scbond_it1.445318972
X-RAY DIFFRACTIONr_scbond_other
X-RAY DIFFRACTIONr_scangle_it2.5014.518860
X-RAY DIFFRACTIONr_scangle_other
X-RAY DIFFRACTIONr_long_range_B_refined
X-RAY DIFFRACTIONr_long_range_B_other
X-RAY DIFFRACTIONr_rigid_bond_restr
X-RAY DIFFRACTIONr_sphericity_free
X-RAY DIFFRACTIONr_sphericity_bonded
Refine LS restraints NCS

Refine-ID: X-RAY DIFFRACTION

Ens-IDDom-IDAuth asym-IDNumberTypeRms dev position (Å)Weight position
11A1623medium positional0.230.5
11C1623medium positional0.230.5
11E1623medium positional0.250.5
11G1623medium positional0.240.5
11I1623medium positional0.290.5
11K1623medium positional0.20.5
11M1623medium positional0.210.5
11O1623medium positional0.310.5
11Q1623medium positional0.270.5
11S1623medium positional0.270.5
11U1623medium positional0.270.5
11W1623medium positional0.230.5
11Y1623medium positional0.260.5
11a1623medium positional0.280.5
22B1419medium positional0.480.5
22D1419medium positional0.380.5
22F1419medium positional0.380.5
22H1419medium positional0.380.5
22J1419medium positional0.360.5
22L1419medium positional0.380.5
22N1419medium positional0.40.5
22P1419medium positional0.430.5
22R1419medium positional0.430.5
22T1419medium positional0.380.5
22V1419medium positional0.320.5
22X1419medium positional0.420.5
22Z1419medium positional0.380.5
22b1419medium positional0.390.5
11A2221loose positional0.685
11C2221loose positional0.675
11E2221loose positional0.695
11G2221loose positional0.655
11I2221loose positional0.685
11K2221loose positional0.525
11M2221loose positional0.685
11O2221loose positional0.615
11Q2221loose positional0.665
11S2221loose positional0.695
11U2221loose positional0.695
11W2221loose positional0.645
11Y2221loose positional0.675
11a2221loose positional0.725
11B1623medium thermal4.982
11D1623medium thermal6.042
11F1623medium thermal4.342
11H1623medium thermal4.132
11J1623medium thermal4.72
11L1623medium thermal4.872
11N1623medium thermal2.682
11P1623medium thermal3.862
11R1623medium thermal3.572
11T1623medium thermal5.872
11V1623medium thermal1.852
11X1623medium thermal5.112
11Z1623medium thermal8.172
11b1623medium thermal8.492
22A1419medium thermal0.442
22C1419medium thermal0.612
22E1419medium thermal0.432
22G1419medium thermal0.362
22I1419medium thermal0.442
22K1419medium thermal0.412
22M1419medium thermal0.382
22O1419medium thermal0.332
22Q1419medium thermal0.382
22S1419medium thermal0.642
22U1419medium thermal0.362
22W1419medium thermal0.452
22Y1419medium thermal0.492
22a1419medium thermal0.922
11B2221loose thermal4.6410
11D2221loose thermal5.5610
11F2221loose thermal4.1610
11H2221loose thermal3.8910
11J2221loose thermal4.4210
11L2221loose thermal4.6310
11N2221loose thermal2.5310
11P2221loose thermal3.5510
11R2221loose thermal3.4810
11T2221loose thermal5.510
11V2221loose thermal1.9610
11X2221loose thermal4.710
11Z2221loose thermal7.6610
11b2221loose thermal7.6910
LS refinement shellResolution: 2.64→2.703 Å / Total num. of bins used: 20
RfactorNum. reflection% reflection
Rfree0.308 887 -
Rwork0.287 16688 -
obs--79.87 %
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL11 (°2)L12 (°2)L13 (°2)L22 (°2)L23 (°2)L33 (°2)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T11 (Å2)T12 (Å2)T13 (Å2)T22 (Å2)T23 (Å2)T33 (Å2)Origin x (Å)Origin y (Å)Origin z (Å)
14.2010.70810.16310.18730.14450.2221-0.04720.08410.0504-0.07910.03190.0124-0.0660.01080.01520.35220.00160.02140.360.01650.34646.3644-14.8227-3.4015
20.68170.1790.16410.3466-0.08820.13890.00020.0580.0121-0.044-0.0047-0.0153-0.0612-0.01440.00440.3640.0270.01540.35920.01520.337839.394-6.788-8.4502
34.1881-2.34291.05451.9313-1.51321.66670.08040.10770.0209-0.0429-0.00920.00920.03540.0492-0.07120.34950.0140.02120.3784-0.03230.343353.4373-10.09096.7223
41.5412-0.50340.28440.17-0.06051.33380.07230.00440.02140.00070.0272-0.02350.02850.0397-0.09950.34450.00920.02750.33540.02250.352155.1109-17.64536.2993
50.089-0.347-0.0441.6209-0.08190.54110.0460.0357-0.0163-0.0105-0.09690.14210.0886-0.05290.05090.3337-0.00330.02920.3898-0.00590.323725.0847-20.39040.9429
60.7773-0.2371-0.15070.29750.14440.7294-0.03440.0323-0.01820.06370.0172-0.02710.047-0.03320.01710.35860.00720.01270.33890.01630.338342.7334-20.493712.9675
70.86120.23580.86130.33280.31933.2339-0.035-0.03810.0225-0.0254-0.02480.0202-0.1111-0.23770.05980.33190.02150.01990.3625-0.00040.342526.3644-13.1494-2.5922
80.0709-0.2459-0.11840.99280.56560.55670.0099-0.0423-0.02840.0127-0.0193-0.00040.0667-0.0370.00940.35-0.01090.01620.37780.00860.334136.825-39.0228-21.4029
90.5062-0.6982-0.21852.26160.4780.5139-0.0617-0.0076-0.10220.1469-0.02280.08580.148-0.06640.08450.352-0.03270.03320.35320.0060.337131.3364-44.4853-23.0772
100.21930.12570.49580.31510.13661.2450.0184-0.02490.00120.00580.01270.03570.1349-0.1076-0.03110.3310.01320.00210.3692-0.00760.340947.1423-26.6199-22.2487
110.3024-0.1963-0.46220.22690.54591.32570.04230.02770.0921-0.01890.0006-0.022-0.09310.0447-0.04290.3374-0.00120.02510.37310.01160.334453.998-20.5605-19.6504
120.09040.0660.02280.05210.06654.8048-0.00830.0060.02420.01180.0280.0351-0.0404-0.0599-0.01970.3350.01640.01070.35540.0040.339148.3772-23.7187-20.3815
132.03770.39541.99760.07740.39241.99610.08090.1433-0.04820.01350.0417-0.01440.050.2258-0.12260.33470.01690.0110.3803-0.00970.344260.4038-28.6214-18.2034
149.78896.1246-4.394315.8369-4.23812.1638-0.4291-0.2264-0.554-0.89890.33311.16230.2555-0.00150.09590.32450.05680.01330.3692-0.12570.376747.8065-32.9996-30.9528
157.0911-0.13211.48330.0752-0.04610.32490.0997-0.1144-0.026-0.0124-0.0569-0.00640.0047-0.0459-0.04280.35780.00740.00920.3563-0.00920.34185.4073-49.2411-55.48
160.0086-0.05320.01790.5756-0.21940.10190.0135-0.0315-0.01970.00290.03820.0282-0.06910.0076-0.05170.36990.00060.010.3529-0.00220.341785.3493-40.6484-58.6851
172.33382.194-0.1152.14560.07670.46250.04120.05130.11120.03890.01080.1194-0.0653-0.0135-0.05190.34760.01050.00680.34330.00750.355786.9992-45.6076-66.8935
181.62750.0017-0.40870.36680.49740.78590.02840.0880.0108-0.029-0.0743-0.001-0.0328-0.12920.0460.34610.01140.01090.36050.03070.351272.7675-58.6368-58.9302
193.29241.95141.0941.39291.1271.41020.0694-0.0527-0.07520.0390.0219-0.14220.08440.0343-0.09140.32060.0227-0.00690.3516-0.00720.3696103.4862-54.5821-53.1769
201.1291-0.18350.06730.41630.10190.0404-0.0049-0.056-0.01060.02190.0286-0.02820.0346-0.0079-0.02370.36030.01410.01850.3370.00750.348385.7302-65.6601-58.3316
210.5750.78440.28423.40731.89551.11880.0096-0.0374-0.0787-0.04160.0725-0.1189-0.0480.0791-0.08210.35080.0086-0.00020.3456-0.00120.3513102.1477-48.4009-58.2657
220.022-0.0135-0.16880.238-0.03711.4891-0.01460.0066-0.02130.01820.02770.04230.08190.027-0.01310.35720.0161-0.00090.3527-0.0060.35491.5557-42.6772-26.9537
230.95480.0977-0.83880.04960.01422.1706-0.0843-0.0847-0.10820.04370.04070.0170.19980.19640.04360.37020.0559-0.01020.33220.00380.335697.1099-43.6287-21.2429
240.5405-1.7639-0.73745.92022.16862.15010.04120.00170.0482-0.03050.0096-0.32070.1066-0.2669-0.05080.3564-0.01670.02140.33170.02420.379973.8195-52.0108-41.6349
250.6473-0.7031-0.6010.77140.65320.55840.007-0.02590.07110.03570.0565-0.10760.00450.0154-0.06350.3640.0191-0.00110.3575-0.00730.343484.7525-29.7044-36.4506
260.7517-0.2716-0.18281.90241.27020.8554-0.00170.04180.0186-0.1229-0.07610.1624-0.0505-0.02870.07780.34080.0275-0.00020.34970.00610.331574.4684-37.0321-45.3592
270.13740.24020.20991.34630.52630.3514-0.0236-0.01160.0293-0.0191-0.00960.0645-0.0053-0.00040.03320.33440.01160.01530.35950.00230.342975.6435-37.9076-40.0806
280.11020.26340.02440.64920.1226.56950.09550.0032-0.02670.33650.0015-0.0194-0.00370.2039-0.0970.36350.06340.04480.3372-0.01620.25777.4497-33.0107-29.7745
294.8352-1.51450.04860.7899-0.08820.02080.0354-0.04680.03680.0138-0.0283-0.01850.0232-0.0084-0.00710.3759-0.00620.00950.3550.00030.3358109.5028-21.703132.7174
300.6084-0.2416-0.14110.29840.08630.13520.01250.00290.00220.0733-0.02620.01090.00950.00960.01380.3705-0.0048-0.00290.34670.00460.3435116.0686-16.582140.5292
314.01610.01212.78121.60840.13971.93710.1450.0454-0.05560.0447-0.10420.00070.09880.0123-0.04080.34260.00540.01740.38170.01230.3235103.5815-12.347226.3492
320.65240.21330.44710.4021-0.41781.28170.00340.0756-0.02170.04260.07390.0568-0.0036-0.0248-0.07720.34130.00750.01860.3654-0.01570.359899.8668-18.731922.3203
330.7049-0.26730.87140.8789-0.53631.1494-0.02750.0065-0.0323-0.0705-0.003-0.02710.02290.05380.03050.34610.02650.02650.38120.00090.3635130.3243-25.996426.6729
341.80640.114-0.18580.8823-0.12650.03820.02180.04490.0094-0.0899-0.0456-0.01380.0382-0.00740.02380.35370.01030.00930.37140.00080.3178113.0099-20.019615.5942
350.30880.13610.3240.5758-0.76852.03850.06560.038-0.04760.0522-0.0734-0.1035-0.07950.08580.00780.3250.00880.01660.3620.02470.3618129.2403-20.788932.9649
360.13240.3635-0.0441.2819-0.31580.20230.01830.0150.0092-0.0693-0.0159-0.03170.0414-0.0182-0.00240.35210.02590.0070.34390.00890.3552117.3139-51.628738.8992
371.37470.92990.34332.3650.03560.1253-0.06120.0685-0.1272-0.17830.0267-0.13720.0241-0.0190.03450.3730.02770.03930.33050.0060.3372122.5955-57.5738.2015
380.09870.1716-0.29630.7295-0.74171.0305-0.02450.0018-0.0264-0.0806-0.01270.04040.1815-0.01640.03720.3510.00760.01440.3277-0.00580.3536106.9346-40.512842.9473
390.0670.06260.14230.647-0.55681.16670.00580.01990.00890.0362-0.01090.06990.0062-0.04280.00520.35270.00370.03130.34220.01160.349102.1602-35.751844.1036
401.69651.1196-0.68561.1683-0.2822.69370.1681-0.23090.11720.0253-0.030.0562-0.21630.2834-0.13820.2780.0380.01950.31320.01740.3236104.4641-30.789643.4858
410.0883-0.17710.23850.4378-0.79682.11180.0206-0.0307-0.04710.02990.02470.0622-0.0339-0.0717-0.04520.3316-0.00280.01860.32770.0070.3623100.6067-38.695444.8493
420.1018-0.2278-0.14614.4181.36880.4882-0.18640.0710.00170.24450.2061-0.07120.23220.0073-0.01970.4442-0.0102-0.00420.32520.03310.3732106.1068-49.237449.4487
437.15591.1239-1.15490.2182-0.20630.27840.12230.14440.01370.0913-0.0340.00970.0287-0.0308-0.08830.3639-0.00870.00870.3356-0.00710.364358.2553-87.3725-61.4355
440.29950.18610.0320.122-0.00630.46620.0316-0.0034-0.0018-0.022-0.0143-0.01020.05890.0019-0.01730.36490.00740.0060.3239-0.00230.386264.9707-96.6746-62.7046
450.5356-0.1092-0.00810.9468-1.01211.11370.11340.1303-0.0649-0.0680.00640.14430.0554-0.0528-0.11980.3381-0.01550.00530.3635-0.01630.387251.3104-85.6155-49.0826
460.4405-0.5463-0.34360.76980.64740.9406-0.0721-0.08730.0240.02140.00940.01090.0502-0.07940.06270.34750.0102-0.00770.34270.00830.382449.4245-80.8619-54.4127
471.5803-0.9477-0.73021.3574-0.13880.7683-0.06020.16060.0790.1017-0.0177-0.16040.0218-0.09750.07790.3292-0.00250.00480.3491-0.01350.391279.6501-80.6016-61.6264
481.57490.04810.05180.2536-0.17040.31480.0437-0.0413-0.00370.0046-0.03810.0392-0.08640.0323-0.00560.3639-0.01570.01370.3213-0.00440.358362.6463-75.1-49.3098
490.5061-0.2158-0.35880.78850.46330.79620.02580.00940.03620.0370.012-0.13880.04690.0246-0.03780.35020.0056-0.00290.33560.00960.367878.2729-88.5688-61.2848
500.2839-0.26060.40290.4444-0.54070.9553-0.0199-0.0275-0.0045-0.0116-0.0143-0.0041-0.06750.01750.03430.3604-0.01160.01740.3555-0.02560.346165.8401-73.128-88.6416
511.6048-1.04360.6631.6122-1.02181.209-0.09650.01430.11410.0223-0.0373-0.0746-0.1880.06430.13380.3774-0.0509-0.00310.3111-0.02010.335771.0168-68.7452-92.8611
520.5636-0.0696-0.65890.8210.73651.4631-0.0365-0.1183-0.0326-0.1710.11050.0825-0.21520.1597-0.0740.33540.015-0.00380.3690.02320.333354.3943-80.5788-78.3242
530.0270.06760.23820.26440.81962.62690.0153-0.0279-0.0355-0.03270.01460.0356-0.0224-0.0287-0.02990.3586-0.0127-0.00860.34750.00880.358952.4276-87.7499-82.3683
545.1048-0.17772.72310.5575-0.86222.55130.1709-0.0356-0.4536-0.1390.0133-0.06880.3542-0.0709-0.18420.3875-0.03980.00410.3352-0.03440.378849.1006-95.2031-80.5479
550.1085-0.1199-0.28870.65410.73121.0949-0.01110.042-0.01970.0075-0.0002-0.01350.0212-0.06560.01130.3465-0.00090.00810.34870.01550.361751.296-85.215-79.3448
560.88780.8893-1.46392.5122-0.65724.03710.12880.24530.3023-0.16010.1721-0.0686-0.2686-0.285-0.30080.34250.01640.01080.40940.03870.413650.5309-81.5824-90.3051
579.1673-1.92820.40460.4542-0.09980.03710.08230.01470.21720.0001-0.066-0.1110.005-0.0063-0.01630.35390.00880.00140.3648-0.01080.346767.3492-25.570132.9148
580.8313-0.3874-0.08580.4238-0.06610.0560.0087-0.05980.00190.0289-0.0251-0.014-0.01610.01590.01640.37530.00540.0110.35910.01060.330664.8809-29.466642.711
593.12470.135-1.61650.30630.30941.36020.0376-0.25730.0124-0.0204-0.0385-0.0264-0.01580.220.0010.35490.0218-0.00270.39240.00490.344776.8467-36.897728.8234
600.17340.40140.04891.03690.20180.09140.0103-0.0026-0.0567-0.01880.0182-0.1315-0-0.0081-0.02850.3580.0116-0.00540.39020.01710.339977.4496-30.75524.8441
611.2685-0.0982-1.88971.1605-0.26873.01220.09980.06540.1001-0.0725-0.0395-0.038-0.0335-0.1309-0.06030.33260.0007-0.00810.37520.0080.336547.7828-23.019727.4692
620.80890.2541-0.07370.52040.08250.58140.00750.0324-0.0039-0.0242-0.02940.0055-0.00810.00040.02190.35330.01090.00420.35580.00840.332766.0239-32.357117.7201
630.56670.0545-0.34791.31461.42021.98030.0078-0.0431-0.0315-0.0353-0.04870.08780.0015-0.10140.04090.35070.00380.0060.35190.01570.333550.4299-27.203934.9047
640.4120.37310.10521.2852-0.04170.05110.00140.0932-0.0591-0.03710.02520.0442-0.03210.0158-0.02660.36250.0387-0.00360.3779-0.04810.325862.97074.209332.312
650.93341.0483-0.17261.2139-0.1210.5339-0.03280.08740.0677-0.12950.05570.1127-0.0514-0.0296-0.02290.35840.0331-0.0220.367-0.02260.331957.81579.844130.0006
660.4773-0.6806-0.6450.98821.02632.76750.03690.05-0.0408-0.0752-0.11950.0249-0.1768-0.03990.08260.3241-0.01430.00210.3466-0.02650.36275.6306-9.637432.9931
670.23090.0095-0.1130.67780.98311.5001-0.0273-0.003-0.00170.0381-0.00140.03750.04030.00030.02870.35960.0088-0.01250.3282-0.00450.361675.1457-7.07943.4626
685.3082.07221.37661.71550.48050.36490.0818-0.3116-0.12720.3105-0.02040.01390.0296-0.0717-0.06140.35510.02960.00320.3876-0.02050.324579.3973-12.593848.9916
690.0987-0.2237-0.13830.72360.63420.70810.0046-0.01060.06180.07840.018-0.04490.0643-0.0251-0.02260.33620.00560.0020.3433-0.00790.372976.8615-9.400939.6819
703.6645-3.1337-0.61423.74060.46181.9289-0.0817-0.0510.4085-0.28750.131-0.1934-0.0838-0.0322-0.04930.2991-0.0247-0.01790.3037-0.0340.377578.98831.129440.5414
712.7512-0.3380.16550.16660.11960.215-0.16280.04340.04560.0270.03150.0041-0.023-0.00160.13130.36490.01460.00540.34570.01420.342782.0281-27.8557-108.9224
720.4111-0.22490.04210.3862-0.09390.43480.01140.03150.02770.0648-0.0251-0.0081-0.0193-0.00880.01370.36170.01-0.00110.35790.02830.340888.6332-19.1381-105.8294
735.32635.88723.91289.081.88115.36820.07050.13610.08930.1542-0.04910.1405-0.12230.0333-0.02130.31970.08350.00460.41650.03680.290876.1248-24.4366-119.6694
740.57990.6737-0.19120.8336-0.09770.4163-0.00680.10250.0292-0.00370.08260.04470.0074-0.02-0.07580.34630.0335-0.01240.3831-0.02650.341772.6137-31.9176-118.8669
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1630.99050.08150.99420.36-0.18592.0163-0.0929-0.11390.17040.1270.0332-0.0029-0.156-0.14950.05970.40170.05040.02720.3132-0.00070.343133.193166.2173-6.6541
1642.9978-1.46611.01195.0776-1.47372.83780.021-0.07530.43610.30210.06410.2117-0.35130.1167-0.08510.3650.0054-0.01720.34150.03670.423655.564483.7711-28.0533
1650.0608-0.0608-0.01951.4117-0.43360.1639-0.05220.01090.01050.04770.0216-0.02880.0167-0.04710.03060.4014-0.00240.00420.36790.01810.322549.651262.5131-27.1876
1665.7419-3.86281.29013.883-2.1091.54610.00130.6021-0.1819-0.0501-0.2844-0.08350.10720.08020.28310.33490.01780.04080.32940.03090.367254.286759.0729-35.6177
1670.04070.082-0.10471.20860.02770.3310.0034-0.00160.0012-0.0065-0.0347-0.04310.0065-0.01810.03130.3705-0.0070.01140.36260.0270.351652.904265.9592-27.6483
1684.8341-2.4383-4.55881.70430.8968.6768-0.2411-0.0599-0.01290.0940.22110.10430.3199-0.54590.020.36950.05050.02370.3530.02460.410549.334956.8718-17.3432
1695.56230.8234-1.60460.1288-0.25511.1175-0.05420.0714-0.14770.0374-0.0002-0.0046-0.096-0.0270.05440.3827-0.0323-0.03180.32310.01460.367384.429477.2059-36.9652
1700.20420.1261-0.36540.3324-0.07590.81770.01240.01980.01140.0109-0.04540.0182-0.0040.08810.03290.3628-0.0292-0.02560.37250.02030.355491.278767.7065-36.4324
1714.7447-2.20810.95291.3048-0.58940.2705-0.03120.03060.01980.09110.0750.0665-0.0354-0.0673-0.04380.4364-0.015-0.02790.3265-0.00230.327777.935579.8965-25.4593
1720.02150.00260.12460.00770.02880.7496-0.0376-0.01850.00620.01820.0326-0.0064-0.1315-0.05150.0050.3852-0.0337-0.02860.35220.00920.404377.589285-30.7348
1732.5956-0.1055-2.48250.10210.42573.52430.0767-0.01320.0251-0.0427-0.0212-0.0241-0.22760.1414-0.05560.3624-0.0802-0.02850.38150.0480.4101105.725684.7384-39.1446
1741.0523-0.38330.18650.7158-0.65710.63780.07290.1570.17410.1462-0.0847-0.024-0.16120.06970.01180.4317-0.0682-0.04210.2984-0.01290.383288.290392.0013-27.7611
1750.38090.67790.30741.56411.2943.5329-0.0426-0.0130.05680.0736-0.14890.00840.03770.43240.19150.3107-0.0563-0.05480.4120.07060.3549104.319976.2677-36.9402
1760.2432-0.07330.10040.501-0.44521.03160.044-0.0806-0.01960.0306-0.03730.028-0.05860.0081-0.00660.345-0.03410.02250.3453-0.00260.349891.210585.0691-66.5908
1770.7785-0.52570.25850.88-0.68171.0364-0.0368-0.0490.0549-0.0125-0.02750.0063-0.05810.04960.06430.3529-0.03550.00630.3215-0.00690.349596.318488.5654-71.6961
1780.0872-0.2879-0.23931.43960.90530.99-0.0014-0.05030.0924-0.09070.0885-0.0933-0.11760.0066-0.08710.3592-0.0336-0.02110.35460.00420.337880.189179.9232-54.7523
1790.13130.24350.40990.68560.89991.3764-0.0236-0.02160.01040.0156-0.0366-0.0138-0.0453-0.0140.06010.3697-0.048-0.00550.34290.02790.358478.298571.9265-57.0675
1800.69870.63550.65512.07910.49781.59040.0647-0.0651-0.06110.1424-0.1194-0.18540.1129-0.03590.05470.2974-0.04630.01290.35410.01910.36179.190673.0052-49.1148
1810.1983-0.2347-0.48140.52090.64641.20150.00830.0638-0.03060.0163-0.07250.0341-0.0049-0.10120.06420.3434-0.0267-0.00440.36110.01140.364774.681873.3247-57.8237
1820.1052-0.54870.91432.9093-4.82818.02380.02020.04320.0482-0.0591-0.295-0.13370.06240.47190.27480.3545-0.02620.00550.37-0.02560.408978.674974.6813-68.6324
1835.69560.9715-0.29640.4387-0.32020.28850.01280.1096-0.05850.05380.0084-0.0096-0.01020.0254-0.02120.4060.0178-0.01850.3586-0.03510.300485.956935.56050.9975
1840.44990.0632-0.06820.53230.08440.2355-0.0768-0.03320.0266-0.00590.0345-0.0644-0.0239-0.02990.04230.3650.01930.00070.3688-0.00730.34292.107428.7813-5.8323
1851.1625-1.6658-0.47883.12340.0590.7428-0.16520.108-0.01140.17790.0902-0.12870.1198-0.27220.0750.34170.0872-0.02590.4748-0.00690.231678.321629.736112.4527
1862.4808-0.5197-0.58020.6593-0.04460.24560.07550.04750.0514-0.05430.08720.09930.079-0.0343-0.16270.37610.0302-0.05070.3991-0.05980.3277.837736.309110.6055
1870.5101-0.21580.38580.5284-1.14292.4886-0.2107-0.12290.20410.1214-0.013-0.1088-0.23680.05870.22370.3957-0.0329-0.04640.3592-0.05960.4221107.162140.72254.6551
1881.3178-0.0024-0.27920.5006-0.18990.1342-0.1174-0.15970.09730.13920.0924-0.0866-0.0549-0.00260.0250.4010.0779-0.05290.4429-0.06210.283491.328136.830617.7478
1890.9669-0.50670.21950.5078-0.29720.1909-0.0853-0.07250.1113-0.07-0.0458-0.2330.08280.07010.13120.375-0.0165-0.03440.3567-0.00520.3843106.277634.726-1.6795
1900.3626-0.09180.16420.7268-0.11920.2696-0.0305-0.0265-0.02790.0972-0.00020.0083-0.0830.03470.03070.3898-0.032-0.01780.3496-0.00230.358393.46563.5003-11.6312
1911.201-1.4597-0.15243.7263-0.15050.1431-0.1175-0.06650.18930.12570.0314-0.249-0.10070.02830.08620.3964-0.0516-0.06390.3431-0.01260.326898.740669.4853-12.2977
1921.8135-2.3882-0.43084.8486-2.8327.02510.0951-0.2666-0.14860.31520.23740.4492-0.60580.3387-0.33240.47920.0206-0.00330.3176-0.09550.427976.347848.79825.9651
1930.21670.0451-0.01091.0017-0.98871.0002-0.0167-0.02120.10150.1217-0.0463-0.0938-0.15830.10370.06310.3742-0.0297-0.02710.3534-0.02040.389885.456953.1313-19.3046
1940.61360.1324-0.02270.2043-0.32910.637-0.11450.0453-0.03790.00920.056-0.06370.0488-0.1170.05840.3916-0.0101-0.02630.3455-0.01160.373577.17945.6666-14.9126
1950.23980.1107-0.3250.1948-0.18090.4556-0.04630.01060.06280.03150.0992-0.06350.0101-0.0585-0.05290.3910.0094-0.02750.3658-0.00120.366278.56348.5752-11.7138
1964.4113-3.4217-3.55613.20080.679645.32310.59-1.06971.3119-0.8951-0.1485-1.5959-0.5521-0.873-0.44150.41820.16960.42221.70720.5761.113581.896959.3639-20.9424
Refinement TLS group
IDRefine-IDRefine TLS-IDAuth asym-IDAuth seq-ID
1X-RAY DIFFRACTION1A1 - 19
2X-RAY DIFFRACTION2A20 - 70
3X-RAY DIFFRACTION3A71 - 83
4X-RAY DIFFRACTION4A84 - 98
5X-RAY DIFFRACTION5A99 - 112
6X-RAY DIFFRACTION6A113 - 153
7X-RAY DIFFRACTION7A154 - 181
8X-RAY DIFFRACTION8A182 - 242
9X-RAY DIFFRACTION9A243 - 275
10X-RAY DIFFRACTION10B0 - 23
11X-RAY DIFFRACTION11B24 - 54
12X-RAY DIFFRACTION12B55 - 78
13X-RAY DIFFRACTION13B79 - 94
14X-RAY DIFFRACTION14B95 - 99
15X-RAY DIFFRACTION15C1 - 16
16X-RAY DIFFRACTION16C17 - 52
17X-RAY DIFFRACTION17C53 - 81
18X-RAY DIFFRACTION18C82 - 98
19X-RAY DIFFRACTION19C99 - 112
20X-RAY DIFFRACTION20C113 - 153
21X-RAY DIFFRACTION21C154 - 181
22X-RAY DIFFRACTION22C182 - 242
23X-RAY DIFFRACTION23C243 - 275
24X-RAY DIFFRACTION24D0 - 7
25X-RAY DIFFRACTION25D8 - 26
26X-RAY DIFFRACTION26D27 - 56
27X-RAY DIFFRACTION27D57 - 91
28X-RAY DIFFRACTION28D92 - 99
29X-RAY DIFFRACTION29E1 - 19
30X-RAY DIFFRACTION30E20 - 72
31X-RAY DIFFRACTION31E73 - 80
32X-RAY DIFFRACTION32E81 - 98
33X-RAY DIFFRACTION33E99 - 112
34X-RAY DIFFRACTION34E113 - 153
35X-RAY DIFFRACTION35E154 - 181
36X-RAY DIFFRACTION36E182 - 242
37X-RAY DIFFRACTION37E243 - 275
38X-RAY DIFFRACTION38F0 - 19
39X-RAY DIFFRACTION39F20 - 43
40X-RAY DIFFRACTION40F44 - 59
41X-RAY DIFFRACTION41F60 - 94
42X-RAY DIFFRACTION42F95 - 99
43X-RAY DIFFRACTION43G1 - 19
44X-RAY DIFFRACTION44G20 - 71
45X-RAY DIFFRACTION45G72 - 84
46X-RAY DIFFRACTION46G85 - 98
47X-RAY DIFFRACTION47G99 - 112
48X-RAY DIFFRACTION48G113 - 153
49X-RAY DIFFRACTION49G154 - 181
50X-RAY DIFFRACTION50G182 - 242
51X-RAY DIFFRACTION51G243 - 275
52X-RAY DIFFRACTION52H0 - 14
53X-RAY DIFFRACTION53H15 - 42
54X-RAY DIFFRACTION54H43 - 53
55X-RAY DIFFRACTION55H54 - 90
56X-RAY DIFFRACTION56H91 - 99
57X-RAY DIFFRACTION57I1 - 16
58X-RAY DIFFRACTION58I17 - 70
59X-RAY DIFFRACTION59I71 - 83
60X-RAY DIFFRACTION60I84 - 99
61X-RAY DIFFRACTION61I100 - 112
62X-RAY DIFFRACTION62I113 - 153
63X-RAY DIFFRACTION63I154 - 181
64X-RAY DIFFRACTION64I182 - 242
65X-RAY DIFFRACTION65I243 - 275
66X-RAY DIFFRACTION66J0 - 12
67X-RAY DIFFRACTION67J13 - 42
68X-RAY DIFFRACTION68J43 - 53
69X-RAY DIFFRACTION69J54 - 89
70X-RAY DIFFRACTION70J90 - 99
71X-RAY DIFFRACTION71K1 - 19
72X-RAY DIFFRACTION72K20 - 72
73X-RAY DIFFRACTION73K73 - 80
74X-RAY DIFFRACTION74K81 - 98
75X-RAY DIFFRACTION75K99 - 112
76X-RAY DIFFRACTION76K113 - 153
77X-RAY DIFFRACTION77K154 - 181
78X-RAY DIFFRACTION78K182 - 242
79X-RAY DIFFRACTION79K243 - 275
80X-RAY DIFFRACTION80L0 - 6
81X-RAY DIFFRACTION81L7 - 30
82X-RAY DIFFRACTION82L31 - 48
83X-RAY DIFFRACTION83L49 - 93
84X-RAY DIFFRACTION84L94 - 99
85X-RAY DIFFRACTION85M1 - 16
86X-RAY DIFFRACTION86M17 - 51
87X-RAY DIFFRACTION87M52 - 81
88X-RAY DIFFRACTION88M82 - 98
89X-RAY DIFFRACTION89M99 - 112
90X-RAY DIFFRACTION90M113 - 155
91X-RAY DIFFRACTION91M156 - 181
92X-RAY DIFFRACTION92M182 - 242
93X-RAY DIFFRACTION93M243 - 275
94X-RAY DIFFRACTION94N0 - 6
95X-RAY DIFFRACTION95N7 - 42
96X-RAY DIFFRACTION96N43 - 54
97X-RAY DIFFRACTION97N55 - 94
98X-RAY DIFFRACTION98N95 - 99
99X-RAY DIFFRACTION99O1 - 19
100X-RAY DIFFRACTION100O20 - 73
101X-RAY DIFFRACTION101O74 - 83
102X-RAY DIFFRACTION102O84 - 99
103X-RAY DIFFRACTION103O100 - 114
104X-RAY DIFFRACTION104O115 - 181
105X-RAY DIFFRACTION105O182 - 218
106X-RAY DIFFRACTION106O219 - 232
107X-RAY DIFFRACTION107O233 - 275
108X-RAY DIFFRACTION108P0 - 6
109X-RAY DIFFRACTION109P7 - 42
110X-RAY DIFFRACTION110P43 - 57
111X-RAY DIFFRACTION111P58 - 91
112X-RAY DIFFRACTION112P92 - 99
113X-RAY DIFFRACTION113Q1 - 19
114X-RAY DIFFRACTION114Q20 - 70
115X-RAY DIFFRACTION115Q71 - 84
116X-RAY DIFFRACTION116Q85 - 99
117X-RAY DIFFRACTION117Q100 - 113
118X-RAY DIFFRACTION118Q114 - 153
119X-RAY DIFFRACTION119Q154 - 181
120X-RAY DIFFRACTION120Q182 - 242
121X-RAY DIFFRACTION121Q243 - 275
122X-RAY DIFFRACTION122R0 - 7
123X-RAY DIFFRACTION123R8 - 42
124X-RAY DIFFRACTION124R43 - 61
125X-RAY DIFFRACTION125R62 - 94
126X-RAY DIFFRACTION126R95 - 99
127X-RAY DIFFRACTION127S1 - 19
128X-RAY DIFFRACTION128S20 - 73
129X-RAY DIFFRACTION129S74 - 84
130X-RAY DIFFRACTION130S85 - 99
131X-RAY DIFFRACTION131S100 - 112
132X-RAY DIFFRACTION132S113 - 153
133X-RAY DIFFRACTION133S154 - 181
134X-RAY DIFFRACTION134S182 - 242
135X-RAY DIFFRACTION135S243 - 275
136X-RAY DIFFRACTION136T0 - 6
137X-RAY DIFFRACTION137T7 - 42
138X-RAY DIFFRACTION138T43 - 53
139X-RAY DIFFRACTION139T54 - 94
140X-RAY DIFFRACTION140T95 - 99
141X-RAY DIFFRACTION141U1 - 27
142X-RAY DIFFRACTION142U28 - 73
143X-RAY DIFFRACTION143U74 - 84
144X-RAY DIFFRACTION144U85 - 98
145X-RAY DIFFRACTION145U99 - 112
146X-RAY DIFFRACTION146U113 - 155
147X-RAY DIFFRACTION147U156 - 181
148X-RAY DIFFRACTION148U182 - 242
149X-RAY DIFFRACTION149U243 - 275
150X-RAY DIFFRACTION150V0 - 7
151X-RAY DIFFRACTION151V8 - 31
152X-RAY DIFFRACTION152V32 - 46
153X-RAY DIFFRACTION153V47 - 91
154X-RAY DIFFRACTION154V92 - 99
155X-RAY DIFFRACTION155W1 - 19
156X-RAY DIFFRACTION156W20 - 71
157X-RAY DIFFRACTION157W72 - 84
158X-RAY DIFFRACTION158W85 - 99
159X-RAY DIFFRACTION159W100 - 112
160X-RAY DIFFRACTION160W113 - 155
161X-RAY DIFFRACTION161W156 - 181
162X-RAY DIFFRACTION162W182 - 242
163X-RAY DIFFRACTION163W243 - 275
164X-RAY DIFFRACTION164X0 - 4
165X-RAY DIFFRACTION165X5 - 42
166X-RAY DIFFRACTION166X43 - 53
167X-RAY DIFFRACTION167X54 - 94
168X-RAY DIFFRACTION168X95 - 99
169X-RAY DIFFRACTION169Y1 - 19
170X-RAY DIFFRACTION170Y20 - 70
171X-RAY DIFFRACTION171Y71 - 83
172X-RAY DIFFRACTION172Y84 - 99
173X-RAY DIFFRACTION173Y100 - 113
174X-RAY DIFFRACTION174Y114 - 153
175X-RAY DIFFRACTION175Y154 - 181
176X-RAY DIFFRACTION176Y182 - 242
177X-RAY DIFFRACTION177Y243 - 275
178X-RAY DIFFRACTION178Z0 - 14
179X-RAY DIFFRACTION179Z15 - 42
180X-RAY DIFFRACTION180Z43 - 60
181X-RAY DIFFRACTION181Z61 - 93
182X-RAY DIFFRACTION182Z94 - 99
183X-RAY DIFFRACTION183a1 - 19
184X-RAY DIFFRACTION184a20 - 73
185X-RAY DIFFRACTION185a74 - 84
186X-RAY DIFFRACTION186a85 - 98
187X-RAY DIFFRACTION187a99 - 112
188X-RAY DIFFRACTION188a113 - 155
189X-RAY DIFFRACTION189a156 - 181
190X-RAY DIFFRACTION190a182 - 242
191X-RAY DIFFRACTION191a243 - 275
192X-RAY DIFFRACTION192b0 - 4
193X-RAY DIFFRACTION193b5 - 19
194X-RAY DIFFRACTION194b20 - 50
195X-RAY DIFFRACTION195b51 - 94
196X-RAY DIFFRACTION196b95 - 99

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