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- PDB-4kb3: Crystal structure of the mitochondrial peroxiredoxin from Leishma... -

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Basic information

Entry
Database: PDB / ID: 4kb3
TitleCrystal structure of the mitochondrial peroxiredoxin from Leishmania braziliensis in the decameric form
ComponentsPeroxidoxin
KeywordsOXIDOREDUCTASE / Thioredoxin-like / mitochondria
Function / homology
Function and homology information


thioredoxin-dependent peroxiredoxin / peroxiredoxin activity
Similarity search - Function
Peroxiredoxin, AhpC-type / Peroxiredoxin, C-terminal / C-terminal domain of 1-Cys peroxiredoxin / Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant / AhpC/TSA family / Thioredoxin domain profile. / Thioredoxin domain / Glutaredoxin / Glutaredoxin / Thioredoxin-like superfamily ...Peroxiredoxin, AhpC-type / Peroxiredoxin, C-terminal / C-terminal domain of 1-Cys peroxiredoxin / Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant / AhpC/TSA family / Thioredoxin domain profile. / Thioredoxin domain / Glutaredoxin / Glutaredoxin / Thioredoxin-like superfamily / 3-Layer(aba) Sandwich / Alpha Beta
Similarity search - Domain/homology
thioredoxin-dependent peroxiredoxin
Similarity search - Component
Biological speciesLeishmania braziliensis (eukaryote)
MethodX-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.93 Å
AuthorsGiuseppe, P.O. / Souza, T.A.C.B. / Morais, M.A.B. / Murakami, M.T.
CitationJournal: To be Published
Title: Crystal structure of the mitochondrial peroxiredoxin from Leishmania braziliensis in the decameric form
Authors: Souza, T.A.C.B. / Morais, M.A.B. / Giuseppe, P.O. / Murakami, M.T.
History
DepositionApr 23, 2013Deposition site: RCSB / Processing site: RCSB
Revision 1.0May 14, 2014Provider: repository / Type: Initial release

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Structure visualization

Structure viewerMolecule:
MolmilJmol/JSmol

Downloads & links

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Assembly

Deposited unit
A: Peroxidoxin
B: Peroxidoxin
C: Peroxidoxin
D: Peroxidoxin
E: Peroxidoxin
F: Peroxidoxin
G: Peroxidoxin
H: Peroxidoxin
I: Peroxidoxin
J: Peroxidoxin


Theoretical massNumber of molelcules
Total (without water)213,87410
Polymers213,87410
Non-polymers00
Water0
1


  • Idetical with deposited unit
  • defined by author&software
TypeNameSymmetry operationNumber
identity operation1_555x,y,z1
Buried area18630 Å2
ΔGint-108 kcal/mol
Surface area68580 Å2
MethodPISA
Unit cell
Length a, b, c (Å)90.212, 98.901, 228.138
Angle α, β, γ (deg.)90.00, 90.00, 90.00
Int Tables number19
Space group name H-MP212121

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Components

#1: Protein
Peroxidoxin


Mass: 21387.377 Da / Num. of mol.: 10 / Fragment: UNP residues 34-225
Source method: isolated from a genetically manipulated source
Source: (gene. exp.) Leishmania braziliensis (eukaryote) / Gene: LBRM_23_0050 / Production host: Escherichia coli (E. coli)
References: UniProt: A4HCL7, Oxidoreductases; Acting on a peroxide as acceptor; Peroxidases

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Experimental details

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Experiment

ExperimentMethod: X-RAY DIFFRACTION / Number of used crystals: 1

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Sample preparation

CrystalDensity Matthews: 2.38 Å3/Da / Density % sol: 48.3 %
Crystal growTemperature: 291 K / Method: vapor diffusion, hanging drop / pH: 4.4
Details: 0.1 M MMT buffer pH 4.4, 13.9%w/v PEG 1,500, VAPOR DIFFUSION, HANGING DROP, temperature 291K

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Data collection

DiffractionMean temperature: 100 K
Diffraction sourceSource: SYNCHROTRON / Site: LNLS / Beamline: W01B-MX2 / Wavelength: 1.459 Å
DetectorType: MARMOSAIC 225 mm CCD / Detector: CCD / Date: Oct 19, 2012
RadiationProtocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray
Radiation wavelengthWavelength: 1.459 Å / Relative weight: 1
ReflectionResolution: 2.93→40 Å / % possible obs: 99.2 % / Observed criterion σ(F): -3 / Observed criterion σ(I): -3
Reflection shell
Resolution (Å)Diffraction-ID% possible all
2.93-3.11195.5
3.11-3.321100
3.32-3.591100
3.59-3.931100
3.93-4.391100
4.39-5.051100
5.05-6.161100
6.16-8.611100
8.61-40198.3

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Processing

Software
NameVersionClassification
MAR345dtbdata collection
MOLREPphasing
PHENIX(phenix.refine: 1.8_1069)refinement
XDSdata reduction
XDSdata scaling
RefinementMethod to determine structure: MOLECULAR REPLACEMENT / Resolution: 2.93→19.98 Å / SU ML: 0.4 / σ(F): 2 / Phase error: 28.59 / Stereochemistry target values: ML
RfactorNum. reflection% reflection
Rfree0.282 2256 5.07 %
Rwork0.231 --
obs0.234 44517 99.9 %
all-46773 -
Solvent computationShrinkage radii: 0.9 Å / VDW probe radii: 1.11 Å / Solvent model: FLAT BULK SOLVENT MODEL
Refinement stepCycle: LAST / Resolution: 2.93→19.98 Å
ProteinNucleic acidLigandSolventTotal
Num. atoms12942 0 0 0 12942
Refine LS restraints
Refine-IDTypeDev idealNumber
X-RAY DIFFRACTIONf_bond_d0.00613209
X-RAY DIFFRACTIONf_angle_d1.12217880
X-RAY DIFFRACTIONf_dihedral_angle_d15.1534868
X-RAY DIFFRACTIONf_chiral_restr0.0582007
X-RAY DIFFRACTIONf_plane_restr0.0062311
LS refinement shell
Resolution (Å)Rfactor RfreeNum. reflection RfreeRfactor RworkNum. reflection RworkRefine-ID% reflection obs (%)
2.93-2.99350.38311440.36572612X-RAY DIFFRACTION100
2.9935-3.06290.38271480.33972563X-RAY DIFFRACTION100
3.0629-3.13920.33941480.32092605X-RAY DIFFRACTION100
3.1392-3.22380.39691370.31262620X-RAY DIFFRACTION100
3.2238-3.31820.32011420.28672610X-RAY DIFFRACTION100
3.3182-3.42480.32271340.26942616X-RAY DIFFRACTION100
3.4248-3.54660.27061400.24122599X-RAY DIFFRACTION100
3.5466-3.68770.2881320.24122641X-RAY DIFFRACTION100
3.6877-3.85440.29961340.23262610X-RAY DIFFRACTION100
3.8544-4.0560.27781530.20192635X-RAY DIFFRACTION100
4.056-4.30780.23641440.19762652X-RAY DIFFRACTION100
4.3078-4.63650.2581460.17342625X-RAY DIFFRACTION100
4.6365-5.09610.24771450.17872644X-RAY DIFFRACTION100
5.0961-5.81750.24861360.20472695X-RAY DIFFRACTION100
5.8175-7.27020.28441390.24492706X-RAY DIFFRACTION100
7.2702-19.97510.24881340.21572828X-RAY DIFFRACTION100
Refinement TLS params.

Method: refined / Refine-ID: X-RAY DIFFRACTION

IDL112)L122)L132)L222)L232)L332)S11 (Å °)S12 (Å °)S13 (Å °)S21 (Å °)S22 (Å °)S23 (Å °)S31 (Å °)S32 (Å °)S33 (Å °)T112)T122)T132)T222)T232)T332)Origin x (Å)Origin y (Å)Origin z (Å)
14.14421.4491-3.98518.7485-3.92527.3261-0.56310.974-0.6575-0.94220.3324-0.09740.1987-0.08520.33990.7227-0.03680.10370.77620.00390.7141-22.6134-8.3823-25.2158
29.4429-3.05150.46955.92370.26051.63180.32280.47391.20880.5627-0.2474-0.7562-0.75140.16290.06840.7505-0.070.06050.4817-0.00780.5297-37.38117.438-26.5433
32.0918-1.3173.92123.9452.62689.4897-0.0583-0.98850.4674-1.0198-0.3078-0.35340.36510.0970.3270.9315-0.30370.08160.5666-0.00830.5071-33.7844-0.1074-19.3366
46.88381.31142.46356.21031.16154.0647-0.4707-0.6361-0.24062.00120.76340.58781.6745-1.5295-0.34770.9589-0.15210.26061.037-0.28190.7816-52.6977-7.2081-22.6951
58.75440.04052.63981.1116-2.18324.24430.13350.1923-0.34070.0719-0.73590.34971.12010.60520.41251.1483-0.19130.19291.0156-0.0730.5581-45.9966-2.2941-12.3483
62.0932-3.79963.68448.2595.06266.3539-0.52590.59320.19651.5381-0.29180.2846-1.42330.4510.74741.4739-0.09030.31530.6540.02630.7021-36.48695.1566-8.7655
73.6549-1.90771.10041.4823-1.89563.2095-0.1661-0.1461-0.02550.11060.07870.1772-0.0464-0.71030.27180.6598-0.13910.1470.3884-0.14530.5574-49.47651.9456-22.0233
86.02112.84033.71333.2778-1.26455.93590.28780.0086-0.00050.5598-0.10890.0361-1.1493-1.01390.04971.1266-0.15510.17150.6497-0.12380.5147-45.49734.063-20.8467
98.090.66342.54966.841-2.44081.7817-0.78661.5284-0.7793-0.83230.3721-0.27561.13620.28620.28230.9951-0.02390.27870.6365-0.13150.5715-38.4575-7.5085-33.0527
102.98040.06291.56061.0311-0.15894.9960.08290.5963-0.32650.158-0.28440.03480.79940.22980.23410.7975-0.00060.09890.4996-0.04560.443-34.0806-8.1324-22.0344
112.23785.46080.96831.9842.94030.8294-0.8115-0.29510.0056-0.0079-0.05911.1106-0.5805-0.18670.6261.43710.07240.04870.57930.05830.623-39.1569-9.1262-11.5778
122.0746-3.07112.35869.37860.07552.064-0.4489-0.26520.66571.50940.4448-0.4178-1.62742.5732-0.06571.2166-0.2267-0.01661.2513-0.0920.6135-23.8377-2.704-8.7143
132.27121.98830.45582.01670.5775.14470.3862-0.7117-0.246-0.99480.13242.22490.755-0.2392-0.65141.13840.04750.09360.42010.01180.9299-35.7245-24.5824-26.6435
146.86060.40011.81462.6467-1.17534.9681-1.19860.1468-2.16910.62980.68520.57940.56690.62280.34571.59850.17870.20230.44190.14020.7802-25.0424-36.9517-14.5673
152.0393-5.0565-2.20118.6674-2.88682.0165-0.5374-1.9453-0.00620.55110.15931.59290.74610.38850.06371.20220.03010.26650.6157-0.08210.7156-35.5848-29.1705-14.2208
166.17210.55971.98722.49740.11530.65030.5521-0.66630.97290.8008-0.09530.276-0.48850.0673-0.66741.49780.14330.33381.13010.10740.6542-16.3077-20.1077-10.43
179.95590.3754-1.75582.36270.43216.6220.6116-0.960.00630.9855-0.23621.010.03110.6487-0.53881.4727-0.00110.30520.57750.13710.719-30.1896-24.9065-2.9387
183.0786-0.175-0.29181.33710.50436.56320.257-0.1983-0.11240.5595-0.32680.07821.11191.32150.09641.3820.04410.05730.49950.02480.4735-18.7517-28.7069-7.73
191.9977-6.9611-1.10699.8357-2.61835.01521.1446-0.01910.1975-1.7709-0.8961-0.43240.79970.7884-0.07020.97160.24760.12840.87550.09460.5415-19.4063-26.4288-25.2883
202.0172.00892.66481.9325-2.52642.7984-1.4290.04840.03810.1480.34370.25060.2180.02781.0861.0405-0.02410.18610.62150.04730.4531-21.5097-19.7041-24.7191
213.0301-0.50040.11732.7461-0.58492.1814-0.6038-0.0415-0.23320.22540.37320.40320.07310.15610.27060.88-0.05020.08710.4503-0.03850.5127-30.3122-20.5011-18.9406
223.87430.9978-0.7532.7717-0.90971.707-0.11730.287-0.14171.003-0.10580.0833-0.0083-0.61770.34431.18510.10750.19710.68010.00360.5247-32.3281-16.1123-9.1609
231.97675.0962-1.13747.493-5.45484.9672-0.77091.5455-0.91840.5748-0.20561.66540.8613-0.17780.52290.7744-0.13930.4620.5964-0.14331.2294-47.3221-23.5401-12.6015
245.17340.3821-0.82410.26340.75342.86990.0365-0.1545-1.28450.222-0.0468-1.44252.3229-0.09050.02711.0616-0.55570.43650.84450.0682.3822-57.1701-16.4401-15.5752
254.23330.67480.78051.80070.27510.1311-0.91010.6269-0.50480.08650.38950.06920.36241.09880.56091.960.1530.23711.44160.22210.69297.3633-24.7719-40.6665
264.3852-0.7088-0.68845.82874.39281.98920.2342-1.2764-0.26410.16320.4917-1.4425-0.52490.7014-0.411.11330.1902-0.0470.8547-0.00480.54332.2157-17.2775-22.2951
275.64510.609-1.71134.52160.36285.290.06350.986-0.08810.3958-0.1236-0.78330.71580.50830.13371.1704-0.0794-0.0591.28310.05940.92445.4387-13.6058-20.8738
282.16861.52990.60539.31951.46192.1386-0.6758-0.8231.85260.16791.0141-0.15980.25830.7932-0.57580.71830.0681-0.06940.9326-0.01050.77699.658-23.9749-25.7877
296.72080.4679-0.60123.2413.7575.8309-1.4686-1.5732-1.54612.26582.59060.9327-0.23920.1566-0.57441.5420.7043-0.02791.53320.07540.8045-3.7432-33.9737-14.3368
306.56193.2946-0.54655.78040.17391.2321-0.6082-1.94930.2729-2.1597-0.06120.53230.49630.04630.59120.99030.1958-0.06061.3810.04870.56713.5636-29.0706-16.0632
312.9741-1.2901-0.7483.0563-0.55332.4403-0.1759-0.6045-0.22531.10730.025-0.44310.13250.34940.16821.15720.1588-0.14941.05680.10220.51991.5784-25.1646-13.1155
322.038-5.5834-4.33792.08648.51338.6588-0.17871.8402-0.6354-0.5606-0.71070.0855-1.1436-1.07060.72670.99590.3272-0.03120.98110.030.5461-6.7473-22.7935-28.5211
332.05471.897-9.36532.1135-5.31759.4122-0.8744-0.33110.8956-1.70390.32240.13840.4597-0.9930.42810.88120.1149-0.09170.628-0.02220.5081-5.4953-29.1561-30.6988
343.53920.8027-1.09221.0358-0.20771.2648-0.1215-0.6446-0.5704-0.0693-0.0849-0.20920.34610.78530.15050.92670.27550.02810.75730.12690.59694.8729-29.5232-30.0756
353.97964.7442-0.56134.9452-0.7008-0.0208-1.1707-0.8413-0.4342-0.52450.1342-0.7830.57350.59060.93241.15940.49990.0480.98250.13370.862410.4029-37.167-23.1588
366.0579-0.4868-1.45267.1145-2.16142.1354-0.46520.57170.94240.04781.4580.4099-0.10130.5022-0.55610.87970.2841-0.01661.05980.00160.849621.4276-28.2035-31.1736
377.58943.05645.36741.98243.62694.1992-0.4669-0.24050.7518-0.61980.52331.8025-0.56670.2349-0.05551.05170.07450.07040.64150.04931.0053-5.3382-39.888-34.9118
386.1701-1.4474-1.71595.50661.06314.8392-0.5633-2.519-0.75650.6271.30190.36571.12820.5129-0.71780.88410.20050.01041.2086-0.00440.64787.6385-51.9986-49.1611
392-5.0291-3.80968.33343.7516.81860.0442-0.0192-1.6065-0.5958-0.15071.52750.7704-0.60860.51251.1449-0.1407-0.10330.73040.08111.12212.722-55.3116-45.9578
405.7166-1.3046-0.14522.1506-5.37922.2440.39070.29170.60860.439-0.20821.23121.05880.6540.21311.19630.12990.09830.61060.06890.69486.5721-48.3402-37.8985
419.82780.8232-4.8197.70512.36429.495-1.40970.1779-0.38331.0790.7765-1.1506-1.03052.35751.06850.92020.1726-0.18451.3679-0.00090.754521.6087-39.1539-48.5591
421.91870.3957-0.41570.3664-0.3712.5293-0.2999-0.6234-0.375-0.00230.13210.840.53881.14820.26131.17390.3834-0.05010.96320.27351.007719.0848-49.8566-36.4018
438.8458-3.4326.3111.9896-3.7212.01790.44020.3574-0.6969-0.06160.00641.06360.1117-0.2563-0.39681.11860.37320.12210.63270.17931.78029.7852-56.9529-31.6386
442.2346-1.1609-0.49724.3709-0.30311.0047-0.02070.73130.26790.42880.1519-0.39810.65131.308-0.2741.01510.5234-0.01051.31080.13180.67818.3845-48.6967-48.7959
456.0409-1.2147-1.75252.07231.51032.0304-0.1869-0.1463-0.1401-0.46520.01620.88360.20350.17120.16830.85570.3366-0.00090.84370.09780.62273.2562-39.6407-50.2791
464.62594.9804-4.21227.3658-4.93734.7584-0.3549-0.0312-0.02870.82331.0990.3647-0.421-0.9564-0.89220.76910.2329-0.00430.67220.18890.60997.0329-37.9761-43.0064
472.5609-1.6474-0.17622.281.35411.01120.0738-1.0637-0.26141.1258-0.1013-0.48620.07790.08830.00631.11270.2358-0.15011.07940.19710.61668.4258-42.8173-30.8208
481.6508-0.48760.04541.6248-0.67110.30840.552-0.07861.84940.6836-0.95370.97260.32980.02940.38781.0376-0.21380.07150.88310.13161.0941-1.4101-47.8963-15.7714
498.9899-1.22515.82289.13144.50047.01-0.21521.13050.70810.1058-2.1334-0.5993-0.0762-1.1241.63360.53890.1853-0.10731.3836-0.23640.66023.7944-24.5723-79.2215
508.0470.64862.33126.834-3.50849.257-0.3692-0.52340.93030.42650.6984-0.7794-1.51971.1415-0.21710.794-0.0447-0.03610.6616-0.12070.667820.9698-25.7951-66.3807
512.17691.7832-3.74788.9755-1.28382.4857-0.36130.31950.6456-0.11240.09210.4502-0.27791.49910.61040.6781-0.05-0.23590.5342-0.01210.606317.3335-29.8925-76.1293
527.29922.4323-2.38374.827-6.99642.0248-1.5454-0.0599-1.8981-0.93410.89520.76073.2375-0.16080.37771.35140.3626-0.00960.7822-0.0220.67717.6238-46.9051-64.7413
534.6151-0.6797-0.35436.0238-2.97738.5541-0.44440.7713-0.6423-0.2296-0.0946-0.73550.99750.50920.45880.53040.1628-0.01370.9351-0.12670.727825.5241-37.8647-78.4385
542.4733-2.79990.03733.1913-1.94891.9034-0.168-0.7828-0.52570.05960.06590.29720.77171.39420.0030.70170.3173-0.12240.8408-0.07290.650823.7487-39.4545-64.9217
550.78112.02070.81557.8468-1.82826.5068-0.4924-0.0474-0.5801-0.03840.2347-0.02740.09890.2909-0.02450.6090.03880.04410.80950.02410.556124.4074-35.4895-67.5503
564.5813.65522.76642.15480.68425.4459-0.3344-1.35710.93920.91960.13630.88910.1171-0.36010.29280.51360.25950.01090.9961-0.07730.65886.67-33.3574-64.0798
572.54280.6678-1.83583.9484-0.42933.01360.3120.6116-0.21160.21210.29310.65040.0726-0.0479-0.45260.46380.21540.02410.623-0.06180.6310.6526-34.8295-72.7295
582.62370.23120.49196.7684-0.40854.20380.0062-0.221-0.1659-0.09480.6929-0.59320.51310.4287-0.79180.53650.1207-0.02030.903-0.14090.474711.5848-36.9754-79.4494
591.5439-2.77691.98035.7682-3.76533.1435-0.46010.70430.1901-0.33360.2803-1.39180.29950.1429-0.0140.43980.0579-0.00670.8158-0.15990.644817.2142-31.7732-87.6431
609.31343.7614-7.09182.0259-5.86431.9981.3307-0.85580.68210.8078-0.78-1.1741-0.83571.1538-0.6120.8983-0.34160.16061.2184-0.06610.887116.7461-23.172-93.5436
618.34645.7545-2.92722.02451.60363.1211-1.008-0.380.90191.93271.08690.00720.87080.64380.18310.92340.2022-0.0641.13750.16960.6121-2.0662-42.8731-72.4782
622.95810.65935.92192.94640.21132.11610.1669-0.8951-0.69730.40170.69780.07631.7941-1.1035-0.80720.55130.05640.13160.53530.11140.7787-12.3621-44.1194-93.4822
638.3992-2.7340.72564.03122.54512.9399-0.2863-1.1543-0.38530.57650.30640.94040.9612-0.4244-0.09850.74150.0362-0.03950.62930.23180.716-5.8921-47.9432-86.9635
643.62091.14721.25098.4763-5.4719.5342-0.06390.824-0.4477-0.2506-0.2481-2.0884-0.26941.09250.34790.50250.11680.00150.7314-0.05190.7558-0.3583-30.009-99.6045
654.4146-1.8463-0.41735.1581-5.76347.66490.4877-0.1387-0.4129-0.39120.03180.47141.09551.1994-0.28780.80780.1762-0.00290.71650.01480.50434.9623-45.252-97.8629
662.02821.9659-1.4531.98183.59019.54550.39640.2625-0.2401-0.24410.39731.8421.2907-2.4337-0.27440.7473-0.0758-0.02410.66020.15531.18311.279-54.7425-91.2612
675.71460.05850.02763.5078-0.60835.42360.23191.13020.3291-0.4089-0.1695-0.055-0.4657-0.10270.07580.48810.02290.0210.65430.06940.47-5.3335-37.0455-102.5822
683.026-1.06210.4134.2642-1.2740.3405-0.53850.2739-0.71671.4219-0.34470.17961.0754-0.38580.57850.6165-0.13580.1120.54470.02240.6587-5.9992-42.1361-96.724
695.86471.15254.279.7343-1.97413.7145-0.09470.55530.32381.21520.420.9249-0.3536-0.6724-0.17320.4314-0.03420.11610.7279-0.0580.4526-8.9441-31.6717-84.4884
701.1532-0.0861.61633.5814-0.93764.2406-0.0460.2037-0.19830.3161-0.1286-0.24460.29771.14630.28880.41890.16510.02310.7211-0.02080.55520.2707-39.3605-83.0821
710.63080.4962-0.6152.1486-1.20130.0260.17040.6807-0.21420.2092-0.6242-1.15560.02460.18210.51090.4653-0.0116-0.03670.7939-0.03350.74549.3075-41.6147-88.8271
727.6238-2.58483.64811.985-1.35786.91660.7599-1.6949-3.1931.97880.52031.88930.2019-1.2047-1.28620.85680.058-0.13020.70750.37491.00337.7351-56.159-79.2516
738.2885-6.16270.93597.25540.00065.57230.0715-0.7489-0.1833-0.11980.58190.047-0.19460.5799-0.70140.7039-0.12850.0260.7864-0.21650.6048-24.5003-6.9541-88.4637
745.0505-1.6972-2.52347.07062.47074.8342-0.4072-0.01391.4697-0.33170.3528-0.4734-1.0820.8761-0.03220.6996-0.1931-0.16810.5952-0.00680.7567-8.8179-10.4979-100.1752
758.606-2.5580.60841.9916-4.22919.97590.5621-0.58211.06960.4322-0.6883-0.4189-1.23530.79040.01730.5144-0.03370.02820.4635-0.18820.6442-20.8448-9.325-100.5313
763.3019-1.88420.18091.95220.28944.89620.8093-0.2678-0.4142-0.07850.47720.11491.6207-0.4498-1.1950.6592-0.0499-0.0310.60540.03580.7342-18.2097-29.2168-104.6621
774.4448-5.4612-0.27982.05430.91134.89780.2494-0.49090.3238-0.61950.0074-0.1986-0.2687-0.0996-0.44430.7786-0.10130.13430.5868-0.02080.5739-21.6282-13.4253-111.8303
783.7096-2.17910.66773.2971-0.26983.1285-0.3129-0.1890.30060.38840.0186-0.5515-0.010.4320.27690.3829-0.11730.07610.7573-0.02790.4801-12.8795-20.6906-106.5124
793.72420.23411.57697.1829-0.56380.6702-0.07350.1940.67540.1632-0.59780.3556-0.32480.60890.50930.3759-0.1569-0.01550.64420.05950.502-13.069-18.0125-107.1255
802.3126-3.3015-0.81514.3097-1.46694.665-1.2705-2.77851.12070.69291.5389-1.2202-0.3531.5998-0.09590.6303-0.103-0.07310.9015-0.09770.454-17.3452-19.6538-89.5633
812.0607-4.2589-2.31262.04881.98782.00660.4497-0.4901-0.76861.6662-0.7147-0.612-0.32750.39330.55740.5194-0.106-0.0040.73980.09630.6499-20.4259-28.8502-89.6862
820.9801-0.62910.82671.0886-1.67053.6553-0.1595-0.24360.52670.38450.00330.024-0.6402-0.02210.31340.4088-0.0173-0.05280.393-0.07050.5727-26.2615-12.4887-96.4639
830.55522.099-0.88437.2424-2.26620.6271-0.03470.43830.23240.0434-0.27430.6477-0.1282-0.08650.13810.4388-0.0055-0.09210.75120.03220.6807-30.5581-13.934-105.9289
843.56934.3790.66022.0194-2.6672.7886-1.75130.84361.47950.0635-0.6549-0.0101-2.0426-0.63841.1820.9254-0.2485-0.55070.48550.29581.4637-31.56162.309-102.6909
852.0572-6.1691-6.83539.14014.33462.16090.1436-0.8922-1.08890.07430.00240.00610.6943-1.1719-0.04060.5586-0.17450.04410.70580.11370.8179-35.3262-25.8984-87.3318
867.2152-2.8409-1.43672.57421.87564.07670.18030.6081-0.23110.3615-0.56350.42140.5546-0.28320.52320.56840.04930.01860.6968-0.01310.5598-54.6114-21.0379-87.7662
874.8606-2.1272-0.72326.359-0.80493.69820.2607-0.59090.8303-0.8944-0.205-0.1327-1.08830.04510.02550.5927-0.00070.02830.4519-0.08480.5465-46.6112-10.3953-93.2809
886.1188-5.5136-3.27342.01990.03859.2885-0.32830.69991.0396-0.5430.1084-0.8253-1.2157-0.77470.24160.52250.027-0.01610.5621-0.0030.5959-49.0626-9.1316-101.1291
895.4707-2.94792.73898.67311.2572.3101-0.1190.28390.133-0.3094-0.36230.9194-0.3818-0.70370.31850.59260.1146-0.1710.7267-0.04620.7092-50.5696-20.7548-105.5277
904.2246-2.30860.01523.45960.68343.67-0.106-0.10420.531-0.1285-0.37470.1604-0.6049-0.12250.47710.60450.1607-0.0550.4965-0.05710.6096-54.4499-8.4145-92.7639
915.33333.82530.2439.2164.1311.9893-1.1457-0.32980.7154-0.59220.2392-0.3613-1.049-0.82090.81980.49460.05090.00730.5819-0.10890.4954-53.9133-13.3624-93.3539
925.18721.022-0.97762.2931-0.26254.68540.0761-1.03390.30420.90860.0259-1.2067-0.343-0.2336-0.0620.4986-0.0835-0.06760.5332-0.05170.5238-40.5283-11.9811-81.2963
932.26620.41991.33776.60691.13594.8534-0.33480.12770.24660.1780.6633-0.4009-0.29740.2076-0.31380.3920.00090.03280.424-0.03140.4098-38.0764-17.5183-93.017
942.1274.51051.69149.38463.66711.64010.0338-0.0962-0.3738-0.16280.1946-0.6588-0.6869-0.3544-0.13930.6899-0.0053-0.11860.45410.09020.5554-39.3365-10.7129-102.4927
956.3619-3.4852-1.06158.51241.35643.274-0.16771.3586-0.3785-0.3401-0.0266-0.37860.2755-0.5559-0.02010.4743-0.13760.03440.64640.01130.5091-38.4399-25.6054-104.9866
962.0378-2.6758-6.74142.15483.49142.07671.31470.80670.90020.6210.9027-1.9372-0.38041.3395-1.90260.9406-0.1270.18891.3389-0.26341.1945-30.4991-34.7839-108.8316
972.0265.6096-1.3162.03671.46075.5616-0.14880.48030.0335-0.1741.0367-1.72090.7315-0.2356-1.19610.67340.04110.07070.7238-0.16610.9579-44.20663.5553-53.9202
981.59541.21930.83821.6928-2.0038.575-0.6817-0.16440.5296-0.07350.0465-0.5739-0.6927-0.31310.55310.87020.1313-0.07680.4288-0.18510.7251-46.57239.7416-75.8963
997.4366-1.86992.98033.5574-2.88968.46070.8632-1.08530.96010.33060.9681-0.51131.11431.7546-1.25081.2369-0.46460.31440.8561-0.59570.9783-43.002212.6917-74.186
1003.1438-1.9648-2.12715.7229-0.42774.30780.4189-0.00920.59490.0396-0.6122-1.2892-1.10670.9141-0.2140.7917-0.674-0.091-4.5082-3.1062-0.3794-49.627812.0207-66.0702
1012.54922.46550.9413.45861.03543.99140.40860.80150.14510.0109-1.3341.8694-0.7618-2.63121.01320.88470.2864-0.00391.1022-0.3480.7694-60.5494-2.7261-78.626
1024.01351.07810.45071.07121.88454.0172-0.17491.38530.6236-0.7832-0.57370.0175-0.4253-0.57290.72480.75680.4699-0.18381.6362-0.29271.2159-63.76117.5374-72.866
1033.0658-0.1009-0.9591.41990.77514.0501-0.3875-0.00930.7305-0.2212-0.32060.6548-1.1792-0.95190.47090.76580.3042-0.17650.6254-0.27570.7803-56.91958.923-76.8412
1044.02295.6464-0.21597.7041-1.54546.4476-0.1131-0.6928-0.2091-0.1691-0.5447-0.80430.5351.05830.34180.48710.1097-0.0110.7235-0.1180.5836-45.1901-4.2677-69.2668
1052.1018-0.608-0.78045.07290.70491.3347-0.1248-0.0305-0.5170.8616-0.19890.610.2328-0.30760.07710.66590.06670.02930.5605-0.30970.6084-51.93121.2384-65.5227
1061.2671-0.3503-0.98851.2618-0.44931.9194-0.2828-0.21750.06140.11360.08290.2893-0.4697-0.60580.21370.70390.0835-0.02570.9553-0.24610.5527-56.77852.9099-61.4017
1076.87673.1342.16757.321-0.66318.48562.14611.38960.15481.491-1.31731.4928-1.4768-0.5855-0.64481.0020.23310.16311.0794-0.38170.7845-59.275312.4046-56.3976
1088.60184.18552.76247.9467-2.74153.72030.0858-1.49981.10331.0720.2256-0.1008-0.94350.3934-0.07261.1773-0.4935-0.27951.0756-0.98841.2092-54.035919.1235-49.0241
1094.2258-0.3572.62465.8809-5.83957.05990.4531.3762-1.41030.05690.0406-1.98431.41921.0675-0.02240.92840.10190.15740.54510.08891.0958-53.8067-13.1385-60.8667
1100.71571.1688-1.45331.0659-0.695.7979-0.5614-0.1573-0.5531-0.3271-0.54091.15031.36310.6790.20340.9773-0.35990.21550.8348-0.42180.9628-60.9551-14.645-39.0714
1111.40420.6991-1.26830.3625-0.62681.1650.0073-1.22310.2879-1.2667-0.746-0.3590.5735-0.00660.07451.731-0.2837-0.50560.7189-0.6222.1303-65.7753-18.813-48.0101
1122.34611.46040.37754.51651.27774.9332-0.0454-0.81410.75410.012-1.29831.1411-0.4222-2.50731.1250.6563-0.0522-0.04390.9436-0.27590.6236-58.9626-0.4373-41.7954
1132.49040.9291.77625.51151.0925.8534-0.33150.49820.46610.29930.94891.41251.2711-1.60260.0180.6455-0.04990.18021.847-0.78471.0834-71.1958-1.7435-45.6843
1142.2358-2.1738-0.97232.0633-0.12684.38430.8002-0.59780.37270.4508-0.3813-0.05380.2011-0.691-0.38150.7198-0.03080.34190.9505-0.28530.7107-62.3024-4.1283-35.5831
1151.0690.91232.38574.80613.62565.8863-1.8240.2376-0.0431-0.6902-0.79231.6588-1.0382-3.29450.9759-0.5859-1.0431.191.1902-0.07050.3162-64.747-3.0243-36.3296
1167.52461.378-0.73217.1306-2.8662.0614-0.75570.7475-0.80510.0302-0.469-0.19941.63770.10771.01930.6288-0.0050.12230.4873-0.12410.4976-48.8241-9.0421-44.7079
1172.00265.44777.81842.034-7.38832.032-0.96641.1211-1.1883-1.449-1.1981-1.92341.8960.64711.73920.9278-0.04280.34080.66540.0690.7411-44.096-0.7114-42.6259
1182.42360.43370.642-0.1258-0.18282.11530.0003-0.0833-0.57330.0007-0.17520.5032-0.0358-0.63470.17330.6018-0.00140.07410.7042-0.25950.657-58.1908-5.7011-53.8364
1190.8552-0.47832.07532.5765-0.71576.3005-0.48340.7669-0.6032-0.84810.52030.5258-1.6089-0.3124-0.0560.6655-0.04380.03231.1886-0.42680.8477-66.6169-0.6113-55.7273
1202.081-1.4065-1.98865.50492.30422.07511.1482-0.1468-1.1922-0.51030.21990.93671.5737-0.8041-0.93041.0648-0.2382-0.26322.3762-0.79221.0611-72.5085-12.1659-66.0127
Refinement TLS group
IDRefine-IDRefine TLS-IDSelection details
1X-RAY DIFFRACTION1(chain A and resid 36:41)
2X-RAY DIFFRACTION2(chain A and resid 42:64)
3X-RAY DIFFRACTION3(chain A and resid 65:72)
4X-RAY DIFFRACTION4(chain A and resid 73:81)
5X-RAY DIFFRACTION5(chain A and resid 82:91)
6X-RAY DIFFRACTION6(chain A and resid 92:98)
7X-RAY DIFFRACTION7(chain A and resid 99:126)
8X-RAY DIFFRACTION8(chain A and resid 127:136)
9X-RAY DIFFRACTION9(chain A and resid 137:150)
10X-RAY DIFFRACTION10(chain A and resid 151:176)
11X-RAY DIFFRACTION11(chain A and resid 177:186)
12X-RAY DIFFRACTION12(chain A and resid 187:198)
13X-RAY DIFFRACTION13(chain B and resid 36:44)
14X-RAY DIFFRACTION14(chain B and resid 45:64)
15X-RAY DIFFRACTION15(chain B and resid 65:70)
16X-RAY DIFFRACTION16(chain B and resid 71:81)
17X-RAY DIFFRACTION17(chain B and resid 82:98)
18X-RAY DIFFRACTION18(chain B and resid 99:136)
19X-RAY DIFFRACTION19(chain B and resid 137:144)
20X-RAY DIFFRACTION20(chain B and resid 145:150)
21X-RAY DIFFRACTION21(chain B and resid 151:175)
22X-RAY DIFFRACTION22(chain B and resid 176:189)
23X-RAY DIFFRACTION23(chain B and resid 190:197)
24X-RAY DIFFRACTION24(chain B and resid 198:204)
25X-RAY DIFFRACTION25(chain C and resid 36:41)
26X-RAY DIFFRACTION26(chain C and resid 42:52)
27X-RAY DIFFRACTION27(chain C and resid 53:64)
28X-RAY DIFFRACTION28(chain C and resid 65:72)
29X-RAY DIFFRACTION29(chain C and resid 73:81)
30X-RAY DIFFRACTION30(chain C and resid 82:98)
31X-RAY DIFFRACTION31(chain C and resid 99:136)
32X-RAY DIFFRACTION32(chain C and resid 137:144)
33X-RAY DIFFRACTION33(chain C and resid 145:150)
34X-RAY DIFFRACTION34(chain C and resid 151:176)
35X-RAY DIFFRACTION35(chain C and resid 177:185)
36X-RAY DIFFRACTION36(chain C and resid 186:197)
37X-RAY DIFFRACTION37(chain D and resid 36:41)
38X-RAY DIFFRACTION38(chain D and resid 42:55)
39X-RAY DIFFRACTION39(chain D and resid 56:64)
40X-RAY DIFFRACTION40(chain D and resid 65:72)
41X-RAY DIFFRACTION41(chain D and resid 73:81)
42X-RAY DIFFRACTION42(chain D and resid 82:95)
43X-RAY DIFFRACTION43(chain D and resid 96:100)
44X-RAY DIFFRACTION44(chain D and resid 101:136)
45X-RAY DIFFRACTION45(chain D and resid 137:145)
46X-RAY DIFFRACTION46(chain D and resid 146:164)
47X-RAY DIFFRACTION47(chain D and resid 165:195)
48X-RAY DIFFRACTION48(chain D and resid 196:204)
49X-RAY DIFFRACTION49(chain E and resid 36:41)
50X-RAY DIFFRACTION50(chain E and resid 42:64)
51X-RAY DIFFRACTION51(chain E and resid 65:72)
52X-RAY DIFFRACTION52(chain E and resid 73:81)
53X-RAY DIFFRACTION53(chain E and resid 82:98)
54X-RAY DIFFRACTION54(chain E and resid 99:126)
55X-RAY DIFFRACTION55(chain E and resid 127:136)
56X-RAY DIFFRACTION56(chain E and resid 137:150)
57X-RAY DIFFRACTION57(chain E and resid 151:164)
58X-RAY DIFFRACTION58(chain E and resid 165:184)
59X-RAY DIFFRACTION59(chain E and resid 185:193)
60X-RAY DIFFRACTION60(chain E and resid 194:198)
61X-RAY DIFFRACTION61(chain F and resid 36:41)
62X-RAY DIFFRACTION62(chain F and resid 42:58)
63X-RAY DIFFRACTION63(chain F and resid 59:72)
64X-RAY DIFFRACTION64(chain F and resid 73:81)
65X-RAY DIFFRACTION65(chain F and resid 82:95)
66X-RAY DIFFRACTION66(chain F and resid 96:101)
67X-RAY DIFFRACTION67(chain F and resid 102:128)
68X-RAY DIFFRACTION68(chain F and resid 129:136)
69X-RAY DIFFRACTION69(chain F and resid 137:150)
70X-RAY DIFFRACTION70(chain F and resid 151:175)
71X-RAY DIFFRACTION71(chain F and resid 176:189)
72X-RAY DIFFRACTION72(chain F and resid 190:198)
73X-RAY DIFFRACTION73(chain G and resid 36:44)
74X-RAY DIFFRACTION74(chain G and resid 45:64)
75X-RAY DIFFRACTION75(chain G and resid 65:72)
76X-RAY DIFFRACTION76(chain G and resid 73:81)
77X-RAY DIFFRACTION77(chain G and resid 82:97)
78X-RAY DIFFRACTION78(chain G and resid 98:124)
79X-RAY DIFFRACTION79(chain G and resid 125:136)
80X-RAY DIFFRACTION80(chain G and resid 137:148)
81X-RAY DIFFRACTION81(chain G and resid 149:154)
82X-RAY DIFFRACTION82(chain G and resid 155:176)
83X-RAY DIFFRACTION83(chain G and resid 177:189)
84X-RAY DIFFRACTION84(chain G and resid 190:198)
85X-RAY DIFFRACTION85(chain H and resid 36:44)
86X-RAY DIFFRACTION86(chain H and resid 45:64)
87X-RAY DIFFRACTION87(chain H and resid 65:81)
88X-RAY DIFFRACTION88(chain H and resid 82:90)
89X-RAY DIFFRACTION89(chain H and resid 91:98)
90X-RAY DIFFRACTION90(chain H and resid 99:127)
91X-RAY DIFFRACTION91(chain H and resid 128:136)
92X-RAY DIFFRACTION92(chain H and resid 137:152)
93X-RAY DIFFRACTION93(chain H and resid 153:176)
94X-RAY DIFFRACTION94(chain H and resid 177:184)
95X-RAY DIFFRACTION95(chain H and resid 185:195)
96X-RAY DIFFRACTION96(chain H and resid 196:204)
97X-RAY DIFFRACTION97(chain I and resid 36:41)
98X-RAY DIFFRACTION98(chain I and resid 42:55)
99X-RAY DIFFRACTION99(chain I and resid 56:61)
100X-RAY DIFFRACTION100(chain I and resid 62:72)
101X-RAY DIFFRACTION101(chain I and resid 73:81)
102X-RAY DIFFRACTION102(chain I and resid 82:90)
103X-RAY DIFFRACTION103(chain I and resid 91:137)
104X-RAY DIFFRACTION104(chain I and resid 138:150)
105X-RAY DIFFRACTION105(chain I and resid 151:164)
106X-RAY DIFFRACTION106(chain I and resid 165:183)
107X-RAY DIFFRACTION107(chain I and resid 184:193)
108X-RAY DIFFRACTION108(chain I and resid 194:198)
109X-RAY DIFFRACTION109(chain J and resid 36:41)
110X-RAY DIFFRACTION110(chain J and resid 42:59)
111X-RAY DIFFRACTION111(chain J and resid 60:66)
112X-RAY DIFFRACTION112(chain J and resid 67:81)
113X-RAY DIFFRACTION113(chain J and resid 82:98)
114X-RAY DIFFRACTION114(chain J and resid 99:122)
115X-RAY DIFFRACTION115(chain J and resid 123:136)
116X-RAY DIFFRACTION116(chain J and resid 137:148)
117X-RAY DIFFRACTION117(chain J and resid 149:154)
118X-RAY DIFFRACTION118(chain J and resid 155:176)
119X-RAY DIFFRACTION119(chain J and resid 177:193)
120X-RAY DIFFRACTION120(chain J and resid 194:198)

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