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Yorodumi- PDB-4els: Structure of E. Coli. 1,4-dihydroxy-2- naphthoyl coenzyme A synth... -
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Open data
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Basic information
| Entry | Database: PDB / ID: 4els | ||||||
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| Title | Structure of E. Coli. 1,4-dihydroxy-2- naphthoyl coenzyme A synthases (MENB) in complex with bicarbonate | ||||||
Components | 1,4-Dihydroxy-2-naphthoyl-CoA synthase | ||||||
Keywords | LYASE / dihydroxynaphthoic acid synthetase | ||||||
| Function / homology | Function and homology information1,4-dihydroxy-2-naphthoyl-CoA synthase / 1,4-dihydroxy-2-naphthoyl-CoA synthase activity / bicarbonate binding / menaquinone biosynthetic process / cytosol Similarity search - Function | ||||||
| Biological species | ![]() | ||||||
| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.303 Å | ||||||
Authors | Sun, Y.R. / Song, H.G. / Li, J. / Jiang, M. / Li, Y. / Zhou, J.H. / Guo, Z.H. | ||||||
Citation | Journal: Biochemistry / Year: 2012Title: Active site binding and catalytic role of bicarbonate in 1,4-dihydroxy-2-naphthoyl coenzyme A synthases from vitamin K biosynthetic pathways Authors: Sun, Y.R. / Song, H.G. / Li, J. / Jiang, M. / Li, Y. / Zhou, J.H. / Guo, Z.H. | ||||||
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Structure visualization
| Structure viewer | Molecule: Molmil Jmol/JSmol |
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Downloads & links
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Download
| PDBx/mmCIF format | 4els.cif.gz | 607.2 KB | Display | PDBx/mmCIF format |
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| PDB format | pdb4els.ent.gz | 499.7 KB | Display | PDB format |
| PDBx/mmJSON format | 4els.json.gz | Tree view | PDBx/mmJSON format | |
| Others | Other downloads |
-Validation report
| Summary document | 4els_validation.pdf.gz | 514.4 KB | Display | wwPDB validaton report |
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| Full document | 4els_full_validation.pdf.gz | 521.6 KB | Display | |
| Data in XML | 4els_validation.xml.gz | 56.3 KB | Display | |
| Data in CIF | 4els_validation.cif.gz | 78.1 KB | Display | |
| Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/el/4els ftp://data.pdbj.org/pub/pdb/validation_reports/el/4els | HTTPS FTP |
-Related structure data
| Related structure data | ![]() 4elwC ![]() 4elxC ![]() 4emlC ![]() 3ho2S C: citing same article ( S: Starting model for refinement |
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| Similar structure data |
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Assembly
| Deposited unit | ![]()
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| Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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