- PDB-4d4i: Understanding bi-specificity of A-domains -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 4d4i
Title
Understanding bi-specificity of A-domains
Components
APNAA1
Keywords
HYDROLASE / NON-RIBOSOMAL PEPTIDE SYNTHETASE / ADENYLATION / A DOMAIN
Function / homology
Function and homology information
amino acid activation for nonribosomal peptide biosynthetic process / secondary metabolite biosynthetic process / phosphopantetheine binding / nucleotide binding / metal ion binding / cytosol Similarity search - Function
Resolution: 2→60.94 Å / Cor.coef. Fo:Fc: 0.953 / Cor.coef. Fo:Fc free: 0.919 / SU B: 4.276 / SU ML: 0.12 / Cross valid method: THROUGHOUT / ESU R: 0.188 / ESU R Free: 0.174 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.24501
1767
5 %
RANDOM
Rwork
0.18992
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obs
0.19262
33471
99.98 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.2 Å / Solvent model: MASK