xylulose metabolic process / D-xylulokinase activity / xylulokinase / xylulose catabolic process / glucuronate catabolic process to xylulose 5-phosphate / Formation of xylulose-5-phosphate / D-xylose metabolic process / generation of precursor metabolites and energy / carbohydrate metabolic process / phosphorylation ...xylulose metabolic process / D-xylulokinase activity / xylulokinase / xylulose catabolic process / glucuronate catabolic process to xylulose 5-phosphate / Formation of xylulose-5-phosphate / D-xylose metabolic process / generation of precursor metabolites and energy / carbohydrate metabolic process / phosphorylation / ATP binding / cytosol 類似検索 - 分子機能
モノクロメーター: SI(111) / プロトコル: SINGLE WAVELENGTH / 単色(M)・ラウエ(L): M / 散乱光タイプ: x-ray
放射波長
波長: 0.9537 Å / 相対比: 1
反射
解像度: 1.97→36.8 Å / Num. obs: 131532 / % possible obs: 100 % / Observed criterion σ(I): -3 / 冗長度: 5.7 % / Biso Wilson estimate: 37.64 Å2 / Rmerge(I) obs: 0.14 / Net I/σ(I): 9.8
反射 シェル
解像度: 1.97→2 Å / 冗長度: 4.7 % / Mean I/σ(I) obs: 0.5 / % possible all: 99.8
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解析
ソフトウェア
名称
バージョン
分類
BUSTER
2.11.1
精密化
XDS
データ削減
Aimless
データスケーリング
PHASER
位相決定
精密化
構造決定の手法: 分子置換 開始モデル: HUMAN D-XYLULOSE DETERMINED BY TWO-ENERGY SELENIUM MAD 解像度: 1.97→36.82 Å / Cor.coef. Fo:Fc: 0.9546 / Cor.coef. Fo:Fc free: 0.9448 / SU R Cruickshank DPI: 0.221 / 交差検証法: THROUGHOUT / σ(F): 0 / SU R Blow DPI: 0.133 / SU Rfree Blow DPI: 0.119 / SU Rfree Cruickshank DPI: 0.123 詳細: IDEAL-DIST CONTACT TERM CONTACT SETUP. ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY