- PDB-4aqi: Structure of human S100A15 bound to zinc and calcium -
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ID or keywords:
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Basic information
Entry
Database: PDB / ID: 4aqi
Title
Structure of human S100A15 bound to zinc and calcium
Components
PROTEIN S100-A7A
Keywords
METAL BINDING PROTEIN / S100 / S100-A7A / CANCER / INFLAMMATION / EF-HAND
Function / homology
Function and homology information
Metal sequestration by antimicrobial proteins / transition metal ion binding / calcium-dependent protein binding / calcium ion binding / extracellular space / identical protein binding / cytosol / cytoplasm Similarity search - Function
S-100 / S-100/ICaBP type calcium binding protein signature. / S100/Calcium binding protein 7/8-like, conserved site / S100/CaBP-9k-type, calcium binding, subdomain / S-100/ICaBP type calcium binding domain / S-100/ICaBP type calcium binding domain / EF-hand / Recoverin; domain 1 / EF-Hand 1, calcium-binding site / EF-hand calcium-binding domain. ...S-100 / S-100/ICaBP type calcium binding protein signature. / S100/Calcium binding protein 7/8-like, conserved site / S100/CaBP-9k-type, calcium binding, subdomain / S-100/ICaBP type calcium binding domain / S-100/ICaBP type calcium binding domain / EF-hand / Recoverin; domain 1 / EF-Hand 1, calcium-binding site / EF-hand calcium-binding domain. / EF-hand calcium-binding domain profile. / EF-hand domain / EF-hand domain pair / Orthogonal Bundle / Mainly Alpha Similarity search - Domain/homology
Resolution: 1.7→28.15 Å / Cor.coef. Fo:Fc: 0.959 / Cor.coef. Fo:Fc free: 0.946 / SU B: 2.416 / SU ML: 0.08 / Cross valid method: THROUGHOUT / ESU R: 0.113 / ESU R Free: 0.109 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.23045
589
4.8 %
RANDOM
Rwork
0.19808
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obs
0.1997
11695
99.6 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK