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- PDB-3sgb: STRUCTURE OF THE COMPLEX OF STREPTOMYCES GRISEUS PROTEASE B AND T... -
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Open data
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Basic information
Entry | Database: PDB / ID: 3sgb | |||||||||
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Title | STRUCTURE OF THE COMPLEX OF STREPTOMYCES GRISEUS PROTEASE B AND THE THIRD DOMAIN OF THE TURKEY OVOMUCOID INHIBITOR AT 1.8 ANGSTROMS RESOLUTION | |||||||||
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![]() | COMPLEX(SERINE PROTEINASE-INHIBITOR) | |||||||||
Function / homology | ![]() streptogrisin B / molecular function inhibitor activity / serine-type endopeptidase inhibitor activity / serine-type endopeptidase activity / proteolysis / extracellular region Similarity search - Function | |||||||||
Biological species | ![]() | |||||||||
Method | ![]() | |||||||||
![]() | Read, R.J. / Fujinaga, M. / Sielecki, A.R. / James, M.N.G. | |||||||||
![]() | ![]() Title: Structure of the complex of Streptomyces griseus protease B and the third domain of the turkey ovomucoid inhibitor at 1.8-A resolution. Authors: Read, R.J. / Fujinaga, M. / Sielecki, A.R. / James, M.N. #1: ![]() Title: Crystal and Molecular Structures of the Complex of Alpha-Chymotrypsin with its Inhibitor Turkey Ovomucoid Third Domain at 1.8 Angstroms Resolution Authors: Fujinaga, M. / Sielecki, A.R. / Read, R.J. / Ardelt, W. / Laskowskijunior, M. / James, M.N.G. #2: ![]() Title: Refined Crystal Structure of the Molecular Complex of Streptomyces Griseus Protease B, a Serine Protease, with the Third Domain of the Ovomucoid Inhibitor from Turkey Authors: Fujinaga, M. / Read, R.J. / Sielecki, A. / Ardelt, W. / Laskowski Junior, M. / James, M.N.G. #3: ![]() Title: Crystal Structure Studies and Inhibition Kinetics of Tripeptide Chloromethyl Ketone Inhibitors with Streptomyces Griseus Protease B Authors: James, M.N.G. / Brayer, G.D. / Delbaere, L.T.J. / Sielecki, A.R. / Gertler, A. #4: ![]() Title: The 2.8 Angstroms Resolution Structure of Streptomyces Griseus Protease B and its Homology with Alpha-Chymotrypsin and Streptomyces Griseus Protease A Authors: Delbaere, L.T.J. / Brayer, G.D. / James, M.M.G. #5: ![]() Title: Amino Acid Sequence Alignment of Bacterial and Mammalian Pancreatic Serine Proteases Based on Topological Equivalences Authors: James, M.N.G. / Delbaere, L.T.J. / Brayer, G.D. #6: ![]() Title: Relationship between the Structures and Activities of Some Microbial Serine Proteases. II. Comparison of the Tertiary Structures of Microbial and Pancreatic Serine Proteases Authors: James, M.N.G. #7: ![]() Title: Tertiary Structural Differences between Microbial Serine Proteases and Pancreatic Serine Enzymes Authors: Delbaere, L.T.J. / Hutcheon, W.L.B. / James, M.N.G. / Theissen, W.E. #8: ![]() Title: 4.5 Angstroms Resolution Structure of a Bacterial Serine Protease from Streptomyces Griseus Authors: Codding, P.W. / Delbaere, L.T.J. / Hayakawa, K. / Hutcheon, W.L.B. / James, M.N.G. / Jurasek, L. | |||||||||
History |
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Remark 700 | SHEET THE SEVEN-STRANDED SHEETS BL1 AND BL2 PRESENTED ON SHEET RECORDS BELOW ARE ACTUALLY SIX- ...SHEET THE SEVEN-STRANDED SHEETS BL1 AND BL2 PRESENTED ON SHEET RECORDS BELOW ARE ACTUALLY SIX-STRANDED BETA BARRELS. THIS IS DENOTED BY THE FIRST STRAND RECURRING AS THE LAST STRAND. |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 55.8 KB | Display | ![]() |
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PDB format | ![]() | 43.2 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Summary document | ![]() | 375 KB | Display | ![]() |
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Full document | ![]() | 379.7 KB | Display | |
Data in XML | ![]() | 6.8 KB | Display | |
Data in CIF | ![]() | 10.9 KB | Display | |
Arichive directory | ![]() ![]() | HTTPS FTP |
-Related structure data
Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 18665.285 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() |
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#2: Protein | Mass: 6026.811 Da / Num. of mol.: 1 Source method: isolated from a genetically manipulated source References: UniProt: P68390 |
#3: Water | ChemComp-HOH / |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 1.99 Å3/Da / Density % sol: 38.33 % | |||||||||||||||||||||||||||||||||||
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Crystal grow | *PLUS pH: 6 / Method: vapor diffusion | |||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Reflection | *PLUS Highest resolution: 1.8 Å / Num. all: 20227 / Num. obs: 18082 / Num. measured all: 13937 / Rmerge(I) obs: 2 / Biso Wilson estimate: 13.1 Å2 |
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Processing
Refinement | Resolution: 1.8→6 Å / Rfactor Rwork: 0.125 | ||||||||||||||||||||||||
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Refine analyze | Luzzati coordinate error obs: 0.14 Å | ||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 1.8→6 Å
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Refinement | *PLUS Num. reflection obs: 13457 / σ(I): 2 / Highest resolution: 1.8 Å / Lowest resolution: 6 Å / Rfactor obs: 0.125 | ||||||||||||||||||||||||
Solvent computation | *PLUS | ||||||||||||||||||||||||
Displacement parameters | *PLUS | ||||||||||||||||||||||||
Refine LS restraints | *PLUS
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