| Entry | Database: PDB / ID: 3p6y |
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| Title | CF Im25-CF Im68-UGUAA complex |
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Components | - 5'-R(*UP*GP*UP*AP*A)-3'
- Cleavage and polyadenylation specificity factor subunit 5
- Cleavage and polyadenylation specificity factor subunit 6
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Keywords | RNA BINDING PROTEIN/RNA / RRM domain / RNA binding / nuclear / RNA BINDING PROTEIN-RNA complex |
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| Function / homology | Function and homology information
exon-exon junction complex binding / positive regulation of pro-B cell differentiation / positive regulation of RNA export from nucleus / mRNA cleavage factor complex / interchromatin granule / co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway / perichromatin fibrils / Processing of Intronless Pre-mRNAs / mRNA alternative polyadenylation / mRNA cleavage and polyadenylation specificity factor complex ...exon-exon junction complex binding / positive regulation of pro-B cell differentiation / positive regulation of RNA export from nucleus / mRNA cleavage factor complex / interchromatin granule / co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway / perichromatin fibrils / Processing of Intronless Pre-mRNAs / mRNA alternative polyadenylation / mRNA cleavage and polyadenylation specificity factor complex / positive regulation of stem cell differentiation / mRNA 3'-UTR AU-rich region binding / mRNA 3'-end processing / Signaling by cytosolic FGFR1 fusion mutants / paraspeckles / mRNA 3'-end processing / RNA Polymerase II Transcription Termination / post-transcriptional regulation of gene expression / protein heterotetramerization / ribosomal large subunit binding / Processing of Capped Intron-Containing Pre-mRNA / Signaling by FGFR1 in disease / protein tetramerization / centriolar satellite / histone deacetylase binding / mRNA processing / cell differentiation / nuclear speck / nuclear body / ribonucleoprotein complex / mRNA binding / chromatin binding / centrosome / protein homodimerization activity / RNA binding / nucleoplasm / membrane / identical protein binding / nucleus / cytoplasmSimilarity search - Function Cleavage and polyadenylation specificity factor subunit 6 / CPSF6/7 family / : / CPSF6-like, RSLD domain, N-terminal region / Cleavage/polyadenylation specificity factor subunit 5 / Nucleotide hydrolase / Nucleoside Triphosphate Pyrophosphohydrolase / Nucleoside Triphosphate Pyrophosphohydrolase / Nudix hydrolase domain profile. / NUDIX hydrolase domain ...Cleavage and polyadenylation specificity factor subunit 6 / CPSF6/7 family / : / CPSF6-like, RSLD domain, N-terminal region / Cleavage/polyadenylation specificity factor subunit 5 / Nucleotide hydrolase / Nucleoside Triphosphate Pyrophosphohydrolase / Nucleoside Triphosphate Pyrophosphohydrolase / Nudix hydrolase domain profile. / NUDIX hydrolase domain / RRM (RNA recognition motif) domain / NUDIX hydrolase-like domain superfamily / RNA recognition motif / RNA recognition motif / Eukaryotic RNA Recognition Motif (RRM) profile. / RNA recognition motif domain / RNA-binding domain superfamily / Nucleotide-binding alpha-beta plait domain superfamily / Alpha-Beta Plaits / Alpha-Beta Complex / 2-Layer Sandwich / Alpha BetaSimilarity search - Domain/homology RNA / Cleavage and polyadenylation specificity factor subunit 5 / Cleavage and polyadenylation specificity factor subunit 6Similarity search - Component |
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| Biological species | Homo sapiens (human) |
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| Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.9 Å |
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Authors | Li, H. / Tong, S. / Li, X. / Shi, H. / Gao, Y. / Ge, H. / Niu, L. / Teng, M. |
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Citation | Journal: To be Published Title: Structural basis of pre-mRNA recognition by the human cleavage factor Im complex Authors: Li, H. / Tong, S. / Li, X. / Shi, H. / Gao, Y. / Ge, H. / Niu, L. / Teng, M. |
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| History | | Deposition | Oct 11, 2010 | Deposition site: RCSB / Processing site: PDBJ |
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| Revision 1.0 | Nov 3, 2010 | Provider: repository / Type: Initial release |
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| Revision 1.1 | Jul 13, 2011 | Group: Version format compliance |
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| Revision 1.2 | Nov 1, 2023 | Group: Data collection / Database references / Refinement description Category: chem_comp_atom / chem_comp_bond ...chem_comp_atom / chem_comp_bond / database_2 / pdbx_initial_refinement_model / struct_ref_seq_dif Item: _database_2.pdbx_DOI / _database_2.pdbx_database_accession / _struct_ref_seq_dif.details |
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