- PDB-3o36: Crystal structure of TRIM24 PHD-Bromo complexed with H4(14-19)K16... -
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Basic information
Entry
Database: PDB / ID: 3o36
Title
Crystal structure of TRIM24 PHD-Bromo complexed with H4(14-19)K16ac peptide
Components
Histone H4
Transcription intermediary factor 1-alpha
Keywords
TRANSCRIPTION/Protein Binding / TRIM24 / PHD finger / Bromodomain / H4K16 acetylation / breast cancer / TRANSCRIPTION-Protein Binding complex
Function / homology
Function and homology information
perichromatin fibrils / regulation of vitamin D receptor signaling pathway / Signaling by cytosolic FGFR1 fusion mutants / calcium ion homeostasis / negative regulation of megakaryocyte differentiation / cellular response to estrogen stimulus / protein localization to CENP-A containing chromatin / estrogen response element binding / Replacement of protamines by nucleosomes in the male pronucleus / CENP-A containing nucleosome ...perichromatin fibrils / regulation of vitamin D receptor signaling pathway / Signaling by cytosolic FGFR1 fusion mutants / calcium ion homeostasis / negative regulation of megakaryocyte differentiation / cellular response to estrogen stimulus / protein localization to CENP-A containing chromatin / estrogen response element binding / Replacement of protamines by nucleosomes in the male pronucleus / CENP-A containing nucleosome / Packaging Of Telomere Ends / Recognition and association of DNA glycosylase with site containing an affected purine / Cleavage of the damaged purine / Deposition of new CENPA-containing nucleosomes at the centromere / Recognition and association of DNA glycosylase with site containing an affected pyrimidine / Cleavage of the damaged pyrimidine / Inhibition of DNA recombination at telomere / Meiotic synapsis / telomere organization / Signaling by FGFR1 in disease / RNA Polymerase I Promoter Opening / SUMOylation of chromatin organization proteins / Assembly of the ORC complex at the origin of replication / DNA methylation / Condensation of Prophase Chromosomes / HCMV Late Events / Chromatin modifications during the maternal to zygotic transition (MZT) / ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression / SIRT1 negatively regulates rRNA expression / PRC2 methylates histones and DNA / male germ cell nucleus / epithelial cell proliferation / regulation of signal transduction by p53 class mediator / Defective pyroptosis / HDACs deacetylate histones / nuclear receptor binding / RNA Polymerase I Promoter Escape / Nonhomologous End-Joining (NHEJ) / Transcriptional regulation by small RNAs / Formation of the beta-catenin:TCF transactivating complex / protein catabolic process / lysine-acetylated histone binding / euchromatin / RING-type E3 ubiquitin transferase / RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function / regulation of protein stability / Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3 / NoRC negatively regulates rRNA expression / G2/M DNA damage checkpoint / B-WICH complex positively regulates rRNA expression / HDMs demethylate histones / DNA Damage/Telomere Stress Induced Senescence / response to peptide hormone / PKMTs methylate histone lysines / RMTs methylate histone arginines / Meiotic recombination / Pre-NOTCH Transcription and Translation / nucleosome assembly / Activation of anterior HOX genes in hindbrain development during early embryogenesis / HCMV Early Events / Transcriptional regulation of granulopoiesis / structural constituent of chromatin / ubiquitin protein ligase activity / negative regulation of epithelial cell proliferation / nucleosome / Signaling by BRAF and RAF1 fusions / p53 binding / Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks / RUNX1 regulates transcription of genes involved in differentiation of HSCs / chromatin organization / Processing of DNA double-strand break ends / HATs acetylate histones / Senescence-Associated Secretory Phenotype (SASP) / regulation of apoptotic process / Oxidative Stress Induced Senescence / Estrogen-dependent gene expression / transcription by RNA polymerase II / chromosome, telomeric region / transcription coactivator activity / protein ubiquitination / protein kinase activity / Amyloid fiber formation / protein heterodimerization activity / signaling receptor binding / negative regulation of DNA-templated transcription / chromatin binding / positive regulation of gene expression / protein-containing complex / mitochondrion / DNA binding / RNA binding / extracellular exosome / zinc ion binding / extracellular region / nucleoplasm / membrane / nucleus / cytosol Similarity search - Function
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