- PDB-3ezj: Crystal structure of the N-terminal domain of the secretin GspD f... -
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Basic information
Entry
Database: PDB / ID: 3ezj
Title
Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody
Components
General secretion pathway protein GspD
NANOBODY NBGSPD_7
Keywords
PROTEIN TRANSPORT / GENERAL SECRETORY PATHWAY / SECRETIN / SINGLE CHAIN ANTIBODY / IMMUNE SYSTEM / COMPLEX
Function / homology
Function and homology information
protein secretion by the type II secretion system / type II protein secretion system complex / cell outer membrane / membrane => GO:0016020 Similarity search - Function
Ribosomal Protein S8; Chain: A, domain 1 - #120 / Phage tail protein beta-alpha-beta fold - #30 / Type II secretion system protein GspD / Phage tail protein beta-alpha-beta fold / GspD/PilQ family / NolW-like / Bacterial type II/III secretion system short domain / NolW-like superfamily / Type II/III secretion system / Bacterial type II and III secretion system protein ...Ribosomal Protein S8; Chain: A, domain 1 - #120 / Phage tail protein beta-alpha-beta fold - #30 / Type II secretion system protein GspD / Phage tail protein beta-alpha-beta fold / GspD/PilQ family / NolW-like / Bacterial type II/III secretion system short domain / NolW-like superfamily / Type II/III secretion system / Bacterial type II and III secretion system protein / 3-Layer(bab) Sandwich / Ribosomal Protein S8; Chain: A, domain 1 / Immunoglobulins / Immunoglobulin-like / Sandwich / 2-Layer Sandwich / Mainly Beta / Alpha Beta Similarity search - Domain/homology
#256 - Apr 2021 SARS-CoV-2 Spike and Antibodies similarity (1)
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Assembly
Deposited unit
A: General secretion pathway protein GspD C: General secretion pathway protein GspD E: General secretion pathway protein GspD G: General secretion pathway protein GspD B: NANOBODY NBGSPD_7 D: NANOBODY NBGSPD_7 F: NANOBODY NBGSPD_7 H: NANOBODY NBGSPD_7 hetero molecules
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